Parental gene:

UBE2L3, ENSGGOG00000028073

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:22:5398884..5457796(+)


>ENSGGOG00000028073
ATGAAGGAGCTTGAAGAAATCCGCAAATGTGGGATGAAAAACTTCCGTAACATCCAGGTTGATGAAGCTAATTTATTGAC
TTGGCAAGGGCTTATTGTTCCTGACAACCCTCCATATGATAAGGGGGCCTTCAGAATTGAAATCAACTTTCCAGCAGAGT
ACCCATTCAAACCACCGAAGATCACATTTAAAACAAAGATCTATCACCCAAACATTGACGAAAAGGGGCAGGTCTGTCTG
CCAGTAATTAGTGCTGAAAACTGGAAGCCAGCAACCAAAACCGACCAAGTAATCCAGTCCCTCATAGCACTGGTGAATGA
CCCCCAGCCCGAGCACCCGCTTCGGGCTGACCTAGCTGAAGAATACTCTAAGGACCGTAAAAAATTCTGTAAGAATGCTG
AAGAGTTTACAAAGAAATATGGGGAAAAGCGACCTGTGGACTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 79 .94 RPM
SRP007412_cerebellum 76 .16 RPM
SRP007412_heart 22 .11 RPM
SRP007412_kidney 60 .97 RPM
SRP007412_liver 32 .34 RPM
SRP007412_testis 61 .33 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000015284 ortholog_one2one 1 retrogene
retro_cfam_1090,
Callithrix jacchus ENSCJAG00000015818 ortholog_one2one 9 retrogenes
retro_cjac_1813, retro_cjac_1815, retro_cjac_1998, retro_cjac_2073, retro_cjac_2511, retro_cjac_2576, retro_cjac_2856, retro_cjac_3174, retro_cjac_3296,
Dipodomys ordii ENSDORG00000011406 ortholog_one2one 1 retrogene
retro_dord_357,
Equus caballus ENSECAG00000019274 possible_ortholog 1 retrogene
retro_ecab_116,
Felis catus ENSFCAG00000008008 ortholog_one2one 1 retrogene
retro_fcat_369,
Gorilla gorilla ENSGGOG00000001368 within_species_paralog 2 retrogenes
retro_ggor_1156, retro_ggor_2321,
Gorilla gorilla ENSGGOG00000003378 within_species_paralog 3 retrogenes
retro_ggor_1843, retro_ggor_2936, retro_ggor_436,
Gorilla gorilla ENSGGOG00000008393 other_paralog 1 retrogene
retro_ggor_76,
Gorilla gorilla ENSGGOG00000010832 within_species_paralog 1 retrogene
retro_ggor_953,
Myotis lucifugus ENSMLUG00000001547 possible_ortholog 1 retrogene
retro_mluc_32,
Monodelphis domestica ENSMODG00000017665 ortholog_one2one 2 retrogenes
retro_mdom_2029, retro_mdom_956,
Mus musculus ENSMUSG00000038965 ortholog_one2one 10 retrogenes
retro_mmus_1619, retro_mmus_1620, retro_mmus_2147, retro_mmus_2212, retro_mmus_2272, retro_mmus_2315, retro_mmus_3205, retro_mmus_3714, retro_mmus_541, retro_mmus_995,
Nomascus leucogenys ENSNLEG00000000192 ortholog_one2one 1 retrogene
retro_nleu_97,
Pongo abelii ENSPPYG00000011602 ortholog_one2one 1 retrogene
retro_pabe_99,
Pan troglodytes ENSPTRG00000014114 ortholog_one2one 1 retrogene
retro_ptro_123,
Tetraodon nigroviridis ENSTNIG00000010600 ortholog_one2many 1 retrogene
retro_tnig_16,
Takifugu rubripes ENSTRUG00000003392 ortholog_one2one 1 retrogene
retro_trub_39,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_861 79.17 96.60
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2. retro_ggor_924 96.60 100.00
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3. retro_ggor_1425 89.26 99.32
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Download FASTA sequences of all ENSGGOG00000028073 retrocopies