Parental gene:

ENSG00000205937, ENSGGOG00000014275

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:16:2408064..2419670(-)


>ENSGGOG00000014275
ATGGATTTATCAGGAGTGAAAAAGAAGAGCTTGCTAGGAGTCAAAGAAAATAATAAAAAGTCCAGCACTAGGGCTCCTTC
ACCTACCAAACGCAAAGACCGCTCAGATGAGAAGTCCAAGGATCGCTCAAAAGATAAAGGGGCCACCAAGGAGTCGAGTG
AGAAGGATCGCGGCCGGGACAAAACCCGAAAGAGGCGCAGCGCTTCCAGTGGTAGCAGCAGTACCAGGTGGGGCGGGCTG
GCCTGGAGCCTGGAGAGGACCTGTGCCACAGCTACACCCCCACTCCCCACAGATGGCTCAGCAGGAAAGGCTTCTGTATG
GGTAGAAGGCAGCCCATCATCTCTGTCCTGTCCCACACACAATAGCTCTTCTGGCTCTCCAAGTCCTTCTCGGCGCAGAC
ACGACAACAGGAGGCGCTCCCGCTCCAAATCCAAACCACCTAAAAGAGATGAAAAGGAGAGGAAAAGGCGGAGCCCATCT
CCTAAGCCCACCAAAGTGCACATTGGGAGACTCACCCGGAATGTGACAAAGGATCACATCATGGAGATATTTTCCACCTA
TGGGAAAATTAAAATGATTGACATGCCCGTGGAAAGGATGCATCCCCATCTGTCCAAAGGCTATGCGTACGTCGAGTTTG
AGAATCCAGATGAAGCTGAGAAGGCGCTGAAGCACATGGATGGAGTTTTCATAGAAATGCAGCATTTTGAGAACACAGCC
CACAGTGCTGTCTGGGCTGCCAGGCCTGCCCCCAGGAGATTCAGCCCTCCCAGGAGAATGTTGCCACCACCGCCTATGTG
GCGCAGGTCTCCCCCACGGATGAGGAGAAGGTCCCGCTCCCCGAGGCGCAGGTCCCCCGTGCGCCGGAGATCACGGTCCC
CGGGCCGCCGCCGCCACAGGAGCCGCTCCAGCTCCAACTCCTCCCGATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 51 .84 RPM
SRP007412_cerebellum 51 .26 RPM
SRP007412_heart 12 .57 RPM
SRP007412_kidney 21 .83 RPM
SRP007412_liver 13 .27 RPM
SRP007412_testis 27 .66 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017861 possible_ortholog 1 retrogene
retro_amel_194,
Bos taurus ENSBTAG00000009969 possible_ortholog 7 retrogenes
retro_btau_1187, retro_btau_1239, retro_btau_1283, retro_btau_1515, retro_btau_764, retro_btau_776, retro_btau_85,
Canis familiaris ENSCAFG00000019397 possible_ortholog 1 retrogene
retro_cfam_449,
Choloepus hoffmanni ENSCHOG00000004866 possible_ortholog 4 retrogenes
retro_chof_1587, retro_chof_1985, retro_chof_2272, retro_chof_493,
Callithrix jacchus ENSCJAG00000014969 ortholog_one2one 2 retrogenes
retro_cjac_2127, retro_cjac_3377,
Cavia porcellus ENSCPOG00000002066 possible_ortholog 2 retrogenes
retro_cpor_363, retro_cpor_953,
Equus caballus ENSECAG00000023288 ortholog_one2many 1 retrogene
retro_ecab_524,
Felis catus ENSFCAG00000007690 possible_ortholog 1 retrogene
retro_fcat_248,
Homo sapiens ENSG00000205937 possible_ortholog 1 retrogene
retro_hsap_2911,
Macropus eugenii ENSMEUG00000008882 ortholog_one2many 1 retrogene
retro_meug_1996,
Myotis lucifugus ENSMLUG00000016808 possible_ortholog 3 retrogenes
retro_mluc_2237, retro_mluc_2618, retro_mluc_643,
Macaca mulatta ENSMMUG00000019238 possible_ortholog 1 retrogene
retro_mmul_794,
Monodelphis domestica ENSMODG00000015891 ortholog_one2many 1 retrogene
retro_mdom_1171,
Mus musculus ENSMUSG00000034681 possible_ortholog 1 retrogene
retro_mmus_173,
Oryctolagus cuniculus ENSOCUG00000004387 ortholog_one2one 2 retrogenes
retro_ocun_1544, retro_ocun_1745,
Otolemur garnettii ENSOGAG00000031582 ortholog_one2many 1 retrogene
retro_ogar_3241,
Pan troglodytes ENSPTRG00000031310 possible_ortholog 1 retrogene
retro_ptro_1967,
Pteropus vampyrus ENSPVAG00000005105 possible_ortholog 1 retrogene
retro_pvam_296,
Rattus norvegicus ENSRNOG00000008703 possible_ortholog 4 retrogenes
retro_rnor_1537, retro_rnor_2135, retro_rnor_2988, retro_rnor_649,
Sarcophilus harrisii ENSSHAG00000016951 ortholog_one2many 1 retrogene
retro_shar_390,
Ictidomys tridecemlineatus ENSSTOG00000013200 ortholog_one2many 1 retrogene
retro_itri_1160,
Tupaia belangeri ENSTBEG00000009098 possible_ortholog 8 retrogenes
retro_tbel_1262, retro_tbel_1851, retro_tbel_2132, retro_tbel_2154, retro_tbel_2216, retro_tbel_3193, retro_tbel_3286, retro_tbel_4688,
Tarsius syrichta ENSTSYG00000001629 possible_ortholog 1 retrogene
retro_tsyr_957,
Tursiops truncatus ENSTTRG00000008220 possible_ortholog 7 retrogenes
retro_ttru_1010, retro_ttru_1033, retro_ttru_1558, retro_ttru_1808, retro_ttru_1809, retro_ttru_203, retro_ttru_986,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_2016 78.71 100.00
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Download FASTA sequences of all ENSGGOG00000014275 retrocopies