Parental gene:

THUMPD1, ENSGGOG00000005231

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:16:21329579..21334564(-)


>ENSGGOG00000005231
NNAGCTCACGCCGGCGGTAGAGGAGGACGCCAACAGCAGCGGAGAAACGTTTCTCTTTCCTCTCAGCTTGCGCACACCAT
GGCGGCCCCTGCCCAGCAGGCTACTCAGCCTGGCGGCGGGAAGCGCAAAGGCAAGGCTCAGTATGTGCTGGCCAAGCGCG
CTCGGCGCTGCGACGCTGGCGGGCCCCGTCAGCTAGAGCCCGGGCTACAGGGCATCCTCATCACCTGCAATATGAACGAG
CGCAAGTGCGTGGAGGAGGCCTACAGCCTCCTCAACGAATACGGCGACGACATGTATGGGCCAGAAAAGTTTACAGACAA
GGATCAGCAGCCCTCTGGAAGTGAGGGAGAGGAGGATGATGCGGAGGCTGCCTTGAAGAAAGAAGTTGGTGACATTAAGG
CATCTACAGAGATGAGGTTAAGAAGATTCCAGTCAGTGGAAAGTGGAGCAAATAACGTTGTCTTCATCAGGACACTTGGG
ATAGGTAAAAAANAATTGGTGCATCATATTCTCCAGGATATGTACAAAACCAAGAAAAAGAAGACTCGAGTTATTTTGCG
AATGTTACCCATCTCAGGCACATGCAAGGCTTTTTTAGAAGATATGAAAAAATATGCAGAAACATTTTTGGAACCCTGGT
TTAAAGCTCCAAACAAAGGGACATTTCAGATTGTGTACAAATCTCGAAATAACAGTCATGTGAATAGAGAAGAAGTTATC
AGAGAATTGGCAGGAATAGTGTGCACCCTCAATTCAGAAAATAAAGTGGATCTCACCAATCCACAGTACACAGTGGTAGT
AGAAATCATCAAAGCTGTCTGTTGCCTGAGTGTTGTGAAAGATTACATGTTGTTTAGAAAATACAATCTCCAGGAGGTGG
TGAAGAGCCCTAAGGATCTGTCACAGCTTAACTCAAAGCAGGGAAATGGGAAAGAAGCTAAACTGGAATCTGCAGACAAA
TCTGACCAAAACAACACAGCAGAAGGAAAAAATAACCAGCAGGTACCAGCGAATACTGAGGAGCTGGGGCAGACAAAACC
AACGTCTAATCCACAGGTGGTAAATGAGGGAGGAGCCAAACCTGAACTTGCAAGTCAAGCCACAGAAGGATCCAAGTCAA
ATGAAAATGACCTCTCATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 12 .95 RPM
SRP007412_cerebellum 8 .31 RPM
SRP007412_heart 2 .22 RPM
SRP007412_kidney 11 .04 RPM
SRP007412_liver 5 .43 RPM
SRP007412_testis 29 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000009499 ortholog_one2many 1 retrogene
retro_cjac_915,
Cavia porcellus ENSCPOG00000008919 ortholog_one2many 1 retrogene
retro_cpor_71,
Felis catus ENSFCAG00000015158 ortholog_one2one 1 retrogene
retro_fcat_195,
Homo sapiens ENSG00000066654 ortholog_one2one 1 retrogene
retro_hsap_2521,
Macaca mulatta ENSMMUG00000004225 ortholog_one2one 1 retrogene
retro_mmul_1599,
Monodelphis domestica ENSMODG00000006971 ortholog_one2many 1 retrogene
retro_mdom_54,
Nomascus leucogenys ENSNLEG00000012369 ortholog_one2one 1 retrogene
retro_nleu_1443,
Pan troglodytes ENSPTRG00000007848 ortholog_one2one 1 retrogene
retro_ptro_1466,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1573 82.02 59.89
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Download FASTA sequences of all ENSGGOG00000005231 retrocopies