Parental gene:

CDK4, ENSGGOG00000001404

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:12:55919962..55924109(-)


>ENSGGOG00000001404
ATGGCTACCTCTCGATATGAGCCAGTGGCTGAAATTGGTGTCGGTGCCTATGGGACAGTGTACAAGGCCCGTGATCCCCA
CAGTGGCCACTTTGTGGCCCTCAAGAGTGTGAGAGTCCCCAATGGAGGAGGAGGTGGAGGAGGCCTTCCCATCAGCACAG
TTCGTGAGGTGGCTTTACTGAGGCGACTGGAGGCTTTTGAGCATCCCAATGTTGTCCGGCTGATGGACGTCTGTGCCACA
TCCCGAACTGACCGGGAGATCAAGGTAACCCTGGTGTTTGAGCATGTAGACCAGGACCTAAGGACATATCTGGACAAGGC
ACCCCCACCAGGCTTGCCAGCCGAAACCATCAAGGATCTGATGCGCCAGTTTCTAAGAGGCCTAGATTTCCTTCATGCCA
ATTGCATCGTTCACCGAGATCTGAAGCCAGAGAACATTCTGGTGACAAGTGGTGGAACAGTCAAGCTGGCTGACTTTGGC
CTGGCCAGAATCTACAGCTACCAGATGGCACTTACACCCGTGGTTGTTACACTCTGGTACCGAGCTCCCGAAGTTCTTCT
GCAGTCCACATATGCAACACCTGTGGACATGTGGAGTGTTGGCTGTATCTTTGCAGAGATGTTTCGTCGAAAGCCTCTCT
TCTGTGGAAACTCTGAAGCCGACCAGTTGGGCAAAATCTTTGACCTGATTGGGCTGCCTCCAGAGGATGACTGGCCTCGA
GATGTATCCCTGCCCCGTGGAGCCTTTCCCCCTAGAGGGCCCCGCCCAGTGCAGTCGGTGGTACCTGAGATGGAGGAGTC
GGGAGCACAGCTGCTGCTGGAAATGCTGACTTTTAACCCACACAAGCGAATCTCTGCCTTTCGAGCTCTGCAGCACTCTT
ATCTACATAAGGATGAAGGTAATCCGGAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 20 .38 RPM
SRP007412_cerebellum 23 .72 RPM
SRP007412_heart 22 .61 RPM
SRP007412_kidney 57 .20 RPM
SRP007412_liver 34 .11 RPM
SRP007412_testis 31 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000007160 possible_ortholog 1 retrogene
retro_btau_738,
Canis familiaris ENSCAFG00000000280 ortholog_one2one 1 retrogene
retro_cfam_690,
Callithrix jacchus ENSCJAG00000006697 ortholog_one2one 3 retrogenes
retro_cjac_2163, retro_cjac_2891, retro_cjac_2951,
Felis catus ENSFCAG00000029663 ortholog_one2one 1 retrogene
retro_fcat_516,
Gorilla gorilla ENSGGOG00000016879 other_paralog 1 retrogene
retro_ggor_2686,
Macropus eugenii ENSMEUG00000014609 ortholog_one2many 1 retrogene
retro_meug_23,
Microcebus murinus ENSMICG00000003789 ortholog_one2one 1 retrogene
retro_mmur_893,
Myotis lucifugus ENSMLUG00000023651 ortholog_one2one 2 retrogenes
retro_mluc_1137, retro_mluc_354,
Macaca mulatta ENSMMUG00000023694 ortholog_one2one 1 retrogene
retro_mmul_401,
Mus musculus ENSMUSG00000006728 ortholog_one2one 5 retrogenes
retro_mmus_1219, retro_mmus_1298, retro_mmus_2878, retro_mmus_3109, retro_mmus_636,
Nomascus leucogenys ENSNLEG00000017205 ortholog_one2one 1 retrogene
retro_nleu_1847,
Pan troglodytes ENSPTRG00000005147 ortholog_one2one 1 retrogene
retro_ptro_180,
Tarsius syrichta ENSTSYG00000011937 ortholog_one2one 3 retrogenes
retro_tsyr_1383, retro_tsyr_1701, retro_tsyr_544,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_275 74.19 50.83
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Download FASTA sequences of all ENSGGOG00000001404 retrocopies