Parental gene:

CDK4, ENSFCAG00000029663

Aliases:None
Description:cyclin-dependent kinase 4 [Source:HGNC Symbol;Acc:1773]
Organism:Cat (Felis catus)
Coordinates:B4:86457224..86460016(-)


>ENSFCAG00000029663
ATGGCTACTCCTCGATATGAGCCAGTGGCCGAGATTGGTGTTGGTGCTTATGGAACCGTGTACAAGGCCCGTGATCCCCA
CAGTGGCCACTTTGTGGCCCTCAAGAGTGTGAGAGTCCCTAACGGAGGAGGTGCTAGCGGGGGCCTTCCCATCAGCACAG
TTCGTGAGGTGGCCTTACTGAGGCGGCTGGAGGCTTTTGAACATCCCAATGTTGTCCGGCTGATGGATGTCTGTGCCACT
GCCCGAACTGACCGAGAGACCAAAGTGACCCTGGTGTTTGAGCATGTGGACCAAGACCTAAGGACATATCTGGACAAGGC
ACCCCCACCAGGCTTGCCAGTGGAGACTATCAAGGATCTGATGCGCCAGTTTCTAAGAGGCCTAGATTTCCTCCATGCCA
ACTGCATTGTTCATCGAGATCTGAAGCCAGAGAACATTCTGGTGACAAGTGGTGGGACAGTCAAGCTGGCTGACTTTGGC
CTGGCCAGAATCTACAGCTATCAGATGGCACTTACACCTGTGGTTGTTACACTCTGGTACCGTGCTCCGGAAGTTCTTCT
GCAGTCTACGTACGCAACACCTGTGGACATGTGGAGCGTTGGCTGTATCTTCGCAGAGATGTTTCGTCGCAAGCCTCTCT
TCTGTGGAAACTCTGAAGCTGACCAGTTAGGCAAAATCTTTGACCTGATCGGGCTGCCCCCAGAGGATGACTGGCCCCGA
GATGTGTCTCTGCCCCGAGGAGCCTTTTCCCCCAGAGGACCCCGTCCAGTGCAGTCAGTGGTACCTGAGTTGGAGGAGTC
TGGAGCACAGCTGCTGCTGGAGATGCTGACTTTTAACCCACACAAGCGAATCTCTGCCTTCCGAGCCCTGCAGCACTCTT
ATCTACAAAAGGCAGAAGGTAACCCAGAGTGA

Library Parental gene expression (RPM)
SRP017611_liver 17 .59 RPM
SRP017611_kidney 36 .38 RPM
SRP017611_brain 11 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000007160 possible_ortholog 1 retrogene
retro_btau_738,
Canis familiaris ENSCAFG00000000280 ortholog_one2one 1 retrogene
retro_cfam_690,
Callithrix jacchus ENSCJAG00000006697 ortholog_one2one 3 retrogenes
retro_cjac_2163, retro_cjac_2891, retro_cjac_2951,
Felis catus ENSFCAG00000014972 within_species_paralog 1 retrogene
retro_fcat_329,
Gorilla gorilla ENSGGOG00000001404 ortholog_one2one 1 retrogene
retro_ggor_275,
Macropus eugenii ENSMEUG00000014609 ortholog_one2many 1 retrogene
retro_meug_23,
Microcebus murinus ENSMICG00000003789 ortholog_one2one 1 retrogene
retro_mmur_893,
Myotis lucifugus ENSMLUG00000023651 ortholog_one2one 2 retrogenes
retro_mluc_1137, retro_mluc_354,
Macaca mulatta ENSMMUG00000023694 ortholog_one2one 1 retrogene
retro_mmul_401,
Mus musculus ENSMUSG00000006728 ortholog_one2one 5 retrogenes
retro_mmus_1219, retro_mmus_1298, retro_mmus_2878, retro_mmus_3109, retro_mmus_636,
Nomascus leucogenys ENSNLEG00000017205 ortholog_one2one 1 retrogene
retro_nleu_1847,
Pan troglodytes ENSPTRG00000005147 ortholog_one2one 1 retrogene
retro_ptro_180,
Tarsius syrichta ENSTSYG00000011937 ortholog_one2one 3 retrogenes
retro_tsyr_1383, retro_tsyr_1701, retro_tsyr_544,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_516 81.55 55.12
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Download FASTA sequences of all ENSFCAG00000029663 retrocopies