Parental gene:

RNF138, ENSG00000134758

Aliases:RNF138, HSD-4, NARF, STRIN, hNARF
Description:ring finger protein 138, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:17765]
Organism:Human (Homo sapiens)
Coordinates:18:29671817..29711524(+)


>ENSG00000134758
ATGGCCGAGGACCTCTCTGCGGCCACGTCCTACACCGAAGATGATTTCTACTGCCCCGTCTGTCAGGAGGTGCTCAAAAC
GCCCGTGCGGACCACGGCCTGTCAGCACGTTTTCTGTAGAAAATGTTTCCTGACTGCAATGAGGGAAAGCGGAGCACATT
GTCCCCTATGTCGTGGAAATGTGACTAGAAGAGAGAGAGCATGTCCTGAACGGGCCTTAGACCTTGAAAATATAATGAGG
AAGTTTTCTGGTAGCTGCAGATGCTGTGCAAAACAGATTAAATTCTATCGCATGAGACATCATTACAAATCTTGTAAGAA
GTATCAGGATGAATATGGTGTTTCTTCTATCATTCCAAACTTTCAGATCTCTCAAGATTCAGTAGGGAACAGCAATAGGA
GTGAAACATCCACATCTGATAACACAGAAACTTACCAAGAGAATACAAGTTCTTCTGGTCATCCTACTTTTAAGTGTCCC
CTGTGTCAAGAATCAAATTTTACCAGACAGCGTTTACTGGATCACTGTAACAGTAATCACCTATTTCAGATAGTTCCTGT
GACATGTCCTATTTGTGTGTCTCTTCCTTGGGGAGATCCTAGCCAGATTACCAGAAATTTCGTTAGTCATCTAAATCAGA
GACATCAATTTGATTATGGAGAATTTGTGAATCTTCAGCTAGATGAAGAAACCCAATACCAAACTGCTGTTGAAGAATCT
TTTCAAGTAAACATCTGA

Library Parental gene expression (RPM)
bodymap2_liver 13 .14 RPM
bodymap2_lung 37 .73 RPM
bodymap2_breast 28 .19 RPM
bodymap2_adipose 27 .15 RPM
bodymap2_adrenal 49 .72 RPM
bodymap2_skeletal_muscle 12 .44 RPM
bodymap2_thyroid 30 .05 RPM
bodymap2_prostate 23 .64 RPM
bodymap2_colon 24 .31 RPM
bodymap2_testis 153 .29 RPM
bodymap2_brain 28 .97 RPM
bodymap2_heart 8 .64 RPM
bodymap2_white_blood_cells 89 .74 RPM
bodymap2_lymph_node 29 .91 RPM
bodymap2_ovary 44 .22 RPM
bodymap2_kidney 27 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020160 ortholog_one2one 1 retrogene
retro_btau_322,
Choloepus hoffmanni ENSCHOG00000012689 ortholog_one2one 6 retrogenes
retro_chof_1043, retro_chof_1242, retro_chof_1931, retro_chof_418, retro_chof_714, retro_chof_793,
Callithrix jacchus ENSCJAG00000020875 ortholog_one2one 1 retrogene
retro_cjac_2325,
Felis catus ENSFCAG00000014180 ortholog_one2one 2 retrogenes
retro_fcat_1383, retro_fcat_379,
Gorilla gorilla ENSGGOG00000027857 ortholog_one2one 1 retrogene
retro_ggor_1302,
Loxodonta africana ENSLAFG00000003811 ortholog_one2one 1 retrogene
retro_lafr_408,
Monodelphis domestica ENSMODG00000010850 ortholog_one2many 4 retrogenes
retro_mdom_1468, retro_mdom_387, retro_mdom_708, retro_mdom_725,
Mustela putorius furo ENSMPUG00000006982 ortholog_one2one 1 retrogene
retro_mputfur_276,
Nomascus leucogenys ENSNLEG00000006401 ortholog_one2one 1 retrogene
retro_nleu_1665,
Pongo abelii ENSPPYG00000009094 ortholog_one2one 1 retrogene
retro_pabe_2734,
Pan troglodytes ENSPTRG00000009956 ortholog_one2one 1 retrogene
retro_ptro_2155,
Pteropus vampyrus ENSPVAG00000003778 ortholog_one2one 2 retrogenes
retro_pvam_1316, retro_pvam_1379,
Rattus norvegicus ENSRNOG00000015645 ortholog_one2one 3 retrogenes
retro_rnor_2316, retro_rnor_808, retro_rnor_965,
Ictidomys tridecemlineatus ENSSTOG00000002293 ortholog_one2one 2 retrogenes
retro_itri_1443, retro_itri_576,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3319 95.58 73.88
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Download FASTA sequences of all ENSG00000134758 retrocopies