Parental gene:

SNW1, ENSG00000100603

Aliases:SNW1, Bx42, NCOA-62, PRPF45, Prp45, SKIIP, SKIP
Description:SNW domain containing 1 [Source:HGNC Symbol;Acc:16696]
Organism:Human (Homo sapiens)
Coordinates:14:78183941..78227550(-)


>ENSG00000100603
ATGGCGCTCACCAGCTTTTTACCTGCACCTACTCAGCTATCTCAGGACCAGCTTGAGGCTGAAGAAAAGGCAAGATCCCA
GAGATCACGGCAGACCTCACTGGTCTCCTCCCGAAGAGAACCTCCCCCGTACGGATACCGGAAAGGCTGGATACCTCGGT
TATTAGAGGATTTTGGAGATGGAGGTGCTTTTCCAGAGATCCATGTGGCCCAGTATCCACTGGATATGGGACGAAAGAAA
AAAATGTCGAATGCGCTGGCCATTCAGGTGGATTCTGAAGGAAAAATTAAATATGATGCAATTGCTCGACAAGGACAGTC
AAAAGACAAGGTCATTTATAGCAAATACACTGACCTGGTTCCAAAGGAGGTTATGAATGCAGATGATCCAGACCTGCAAA
GGCCCGATGAAGAAGCTATTAAAGAGATAACAGAAAAGACAAGAGTAGCCTTAGAAAAATCTGTATCACAGAAGGTCGCC
GCAGCCATGCCAGTTCGAGCAGCTGACAAATTGGCTCCTGCTCAGTATATCCGATACACACCATCTCAGCAAGGAGTGGC
ATTCAACTCTGGAGCTAAACAGAGGGTTATTCGGATGGTAGAAATGCAGAAAGATCCAATGGAGCCTCCAAGGTTCAAGA
TTAATAAGAAAATTCCCCGGGGACCACCTTCTCCTCCTGCGCCTGTCATGCATTCTCCTAGCCGAAAGATGACTGTAAAG
GAACAACAAGAGTGGAAGATTCCTCCTTGTATTTCTAACTGGAAAAATGCAAAGGGTTATACAATTCCATTAGACAAACG
TCTGGCTGCTGATGGAAGAGGACTACAGACAGTACACATAAATGAAAATTTCGCCAAATTGGCAGAAGCCCTCTACATTG
CTGATCGGAAGGCTCGTGAAGCTGTGGAAATGCGTGCCCAAGTAGAGAGAAAAATGGCTCAGAAAGAAAAGGAAAAACAT
GAAGAGAAACTTAGAGAAATGGCCCAGAAAGCCAGGGAGAGAAGAGCTGGGATCAAAACTCATGTGGAAAAAGAGGATGG
GGAGGCACGTGAGAGGGATGAAATCCGGCATGACAGGCGAAAAGAGAGACAGCATGACCGGAATCTTTCCAGGGCAGCTC
CTGATAAGAGGTCGAAACTTCAGAGAAATGAAAATCGGGATATCAGTGAAGTTATTGCTCTCGGTGTTCCTAATCCTCGG
ACTTCCAATGAAGTTCAGTATGACCAAAGGCTCTTCAACCAATCCAAGGGTATGGACAGTGGATTTGCAGGTGGAGAAGA
TGAAATTTATAATGTTTATGATCAAGCCTGGAGAGGTGGTAAAGATATGGCCCAGAGTATTTATAGGCCCAGTAAAAATC
TGGACAAGGACATGTATGGTGATGACCTAGAAGCCAGAATAAAGACCAACAGATTTGTTCCCGACAAGGAGTTTTCTGGT
TCAGACCGTAGACAGAGAGGCCGAGAAGGACCAGTGCAGTTTGAGGAAGATCCTTTTGGTTTGGACAAGTTTTTGGAAGA
AGCCAAACAGCATGGTGGCTCTAAAAGACCCTCAGATAGCAGCCGCCCCAAGGAACACGAGCATGAAGGCAAGAAGAGGA
GGAAGGAATAG

Library Parental gene expression (RPM)
bodymap2_liver 22 .07 RPM
bodymap2_lung 64 .21 RPM
bodymap2_breast 58 .70 RPM
bodymap2_adipose 75 .75 RPM
bodymap2_adrenal 66 .69 RPM
bodymap2_skeletal_muscle 55 .13 RPM
bodymap2_thyroid 87 .38 RPM
bodymap2_prostate 71 .17 RPM
bodymap2_colon 66 .28 RPM
bodymap2_testis 127 .22 RPM
bodymap2_brain 55 .32 RPM
bodymap2_heart 30 .77 RPM
bodymap2_white_blood_cells 91 .78 RPM
bodymap2_lymph_node 54 .18 RPM
bodymap2_ovary 85 .28 RPM
bodymap2_kidney 44 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003976 ortholog_one2one 2 retrogenes
retro_amel_163, retro_amel_912,
Canis familiaris ENSCAFG00000030409 ortholog_one2many 1 retrogene
retro_cfam_195,
Dipodomys ordii ENSDORG00000012380 ortholog_one2one 3 retrogenes
retro_dord_693, retro_dord_781, retro_dord_782,
Felis catus ENSFCAG00000001637 ortholog_one2one 1 retrogene
retro_fcat_635,
Gorilla gorilla ENSGGOG00000026016 ortholog_one2one 1 retrogene
retro_ggor_257,
Loxodonta africana ENSLAFG00000003482 ortholog_one2one 2 retrogenes
retro_lafr_474, retro_lafr_787,
Myotis lucifugus ENSMLUG00000005228 ortholog_one2many 2 retrogenes
retro_mluc_387, retro_mluc_805,
Monodelphis domestica ENSMODG00000005252 ortholog_one2one 1 retrogene
retro_mdom_1841,
Mustela putorius furo ENSMPUG00000008724 ortholog_one2one 1 retrogene
retro_mputfur_551,
Mus musculus ENSMUSG00000021039 ortholog_one2one 2 retrogenes
retro_mmus_1022, retro_mmus_387,
Nomascus leucogenys ENSNLEG00000016771 ortholog_one2one 1 retrogene
retro_nleu_982,
Ochotona princeps ENSOPRG00000007568 ortholog_one2one 1 retrogene
retro_opri_737,
Pongo abelii ENSPPYG00000006031 ortholog_one2one 1 retrogene
retro_pabe_454,
Pan troglodytes ENSPTRG00000006587 ortholog_one2one 1 retrogene
retro_ptro_165,
Sorex araneus ENSSARG00000002279 ortholog_one2one 3 retrogenes
retro_sara_403, retro_sara_568, retro_sara_727,
Taeniopygia guttata ENSTGUG00000012340 ortholog_one2one 2 retrogenes
retro_tgut_15, retro_tgut_30,
Tarsius syrichta ENSTSYG00000010951 ortholog_one2one 1 retrogene
retro_tsyr_1871,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_174 86.19 100.00
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Download FASTA sequences of all ENSG00000100603 retrocopies