Parental gene: | YWHAQ, ENSFCAG00000007854 |
| Aliases: | None |
| Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide [Source:HGNC Symbol;Acc:12854] |
| Organism: | Cat (Felis catus) |
| Coordinates: | A3:135457616..135496257(+) |
>ENSFCAG00000007854
ATGGAGAAGACGGAGCTGATCCAGAAGGCGAAGCTGGCCGAGCAGGCCGAGCGCTACGACGACATGGCCACCTGCATGAA
GGCCGTGACCGAGCAGGGCGCCGAGCTGTCGAACGAGGAGCGCAACCTGCTCTCGGTGGCCTACAAGAACGTGGTGGGGG
GCCGCAGGTCCGCCTGGAGGGTCATCTCGAGCATCGAGCAGAAAACCGACACCTCCGACAAGAAGTTGCAGCTGATTAAG
GACTATCGGGAGAAAGTGGAGTCTGAGCTGAGGTCCATCTGCACCACGGTGCTGGAATTGTTGGATAAGTATTTAATAGC
CAATGCAACTAATCCAGAGAGTAAGGTCTTCTATCTGAAAATGAAGGGAGATTACTTCCGGTACCTTGCTGAAGTTGCAT
GTGGTGATGATCGAAAACAAACGATAGATAATTCCCAAGGAGCTTACCAAGAGGCTTTTGATATAAGCAAGAAGGAGATG
CAGCCCACACATCCAATCCGCCTGGGGCTGGCTCTTAACTTTTCTGTATTTTACTATGAGATCCTTAATAACCCAGAGCT
TGCCTGCACACTGGCTAAAACAGCTTTTGATGAGGCCATTGCAGAACTTGATACACTGAACGAAGACTCCTACAAAGACA
GCACCCTCATCATGCAGTTGCTTAGAGACAACCTAACATTATGGACATCAGACAGTGCAGGAGAAGAATGTGACGCGGCA
GAAGGGGCAGAAAACTAA
ATGGAGAAGACGGAGCTGATCCAGAAGGCGAAGCTGGCCGAGCAGGCCGAGCGCTACGACGACATGGCCACCTGCATGAA
GGCCGTGACCGAGCAGGGCGCCGAGCTGTCGAACGAGGAGCGCAACCTGCTCTCGGTGGCCTACAAGAACGTGGTGGGGG
GCCGCAGGTCCGCCTGGAGGGTCATCTCGAGCATCGAGCAGAAAACCGACACCTCCGACAAGAAGTTGCAGCTGATTAAG
GACTATCGGGAGAAAGTGGAGTCTGAGCTGAGGTCCATCTGCACCACGGTGCTGGAATTGTTGGATAAGTATTTAATAGC
CAATGCAACTAATCCAGAGAGTAAGGTCTTCTATCTGAAAATGAAGGGAGATTACTTCCGGTACCTTGCTGAAGTTGCAT
GTGGTGATGATCGAAAACAAACGATAGATAATTCCCAAGGAGCTTACCAAGAGGCTTTTGATATAAGCAAGAAGGAGATG
CAGCCCACACATCCAATCCGCCTGGGGCTGGCTCTTAACTTTTCTGTATTTTACTATGAGATCCTTAATAACCCAGAGCT
TGCCTGCACACTGGCTAAAACAGCTTTTGATGAGGCCATTGCAGAACTTGATACACTGAACGAAGACTCCTACAAAGACA
GCACCCTCATCATGCAGTTGCTTAGAGACAACCTAACATTATGGACATCAGACAGTGCAGGAGAAGAATGTGACGCGGCA
GAAGGGGCAGAAAACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 48 .32 RPM |
| SRP017611_kidney | 138 .82 RPM |
| SRP017611_brain | 306 .21 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000004925 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000015359 | ortholog_one2one | 4 retrogenes | |
| Felis catus | ENSFCAG00000011368 | other_paralog | 1 retrogene | |
| Felis catus | ENSFCAG00000032017 | within_species_paralog | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000005383 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000014740 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000076432 | ortholog_one2one | 10 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000013534 | possible_ortholog | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000010482 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000547 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000008104 | ortholog_one2one | 5 retrogenes | |
| Sorex araneus | ENSSARG00000012476 | ortholog_one2one | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000000871 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_771 | 77.53 | 72.24 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_fcat_1702 | 72.16 | 70.20 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000007854 retrocopies