Parental gene: | ENSFCAG00000006742 |
| Aliases: | None |
| Description: | None |
| Organism: | Cat (Felis catus) |
| Coordinates: | E1:36650689..36661348(-) |
>ENSFCAG00000006742
ATGGCCAACAGCGAACGCACCTTCATTGCCATCAAGCCTGATGGGGTCCAGCGCGGCCTCGTGGGAGAGATCATCAAGCG
TTTTGAGCAAAAGGGATTCCGCCTCGTTGCTATGAAATTAATTCAGGCCTCGGAGGAACTCCTGAAGCAGCACTACATTG
ACCTGAAGGACCGCCCGTTCTTCCCCGGGCTGGTGAAGTACATGAATTCCGGGCCGGTTGTGGCCATGGTCTGGGAGGGA
CTGAACGTGGTAAAGACGGGGCGAGTGATGCTTGGGGAGACCAACCCAGCAGATTCTAAGCCAGGCACCATCCGTGGGGA
CTTCTGCATTCAAGTTGGCAGGAACATCATTCATGGCAGTGATTCAGTAAAAAGTGCAGAGAAAGAAATCAGCCTGTGGT
TTAAGCCTGAAGAATTGGTTGACTACAAGCCTTGTGCTTTTGACTGGATCTACGAATAA
ATGGCCAACAGCGAACGCACCTTCATTGCCATCAAGCCTGATGGGGTCCAGCGCGGCCTCGTGGGAGAGATCATCAAGCG
TTTTGAGCAAAAGGGATTCCGCCTCGTTGCTATGAAATTAATTCAGGCCTCGGAGGAACTCCTGAAGCAGCACTACATTG
ACCTGAAGGACCGCCCGTTCTTCCCCGGGCTGGTGAAGTACATGAATTCCGGGCCGGTTGTGGCCATGGTCTGGGAGGGA
CTGAACGTGGTAAAGACGGGGCGAGTGATGCTTGGGGAGACCAACCCAGCAGATTCTAAGCCAGGCACCATCCGTGGGGA
CTTCTGCATTCAAGTTGGCAGGAACATCATTCATGGCAGTGATTCAGTAAAAAGTGCAGAGAAAGAAATCAGCCTGTGGT
TTAAGCCTGAAGAATTGGTTGACTACAAGCCTTGTGCTTTTGACTGGATCTACGAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 32 .65 RPM |
| SRP017611_kidney | 64 .62 RPM |
| SRP017611_brain | 34 .20 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000008022 | ortholog_one2one | 3 retrogenes | |
| Bos taurus | ENSBTAG00000047186 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000021658 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000003783 | ortholog_one2many | 2 retrogenes | |
| Felis catus | ENSFCAG00000008300 | within_species_paralog | 3 retrogenes | |
| Homo sapiens | ENSG00000011052 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000007784 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000016929 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000001940 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000015573 | ortholog_one2one | 4 retrogenes | |
| Mus musculus | ENSMUSG00000020857 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000002671 | possible_ortholog | 8 retrogenes | |
| Sus scrofa | ENSSSCG00000017591 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000013053 | possible_ortholog | 6 retrogenes | |
| Tursiops truncatus | ENSTTRG00000007433 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_216 | 51.82 | 87.50 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_fcat_663 | 77.57 | 69.74 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_fcat_1083 | 65.74 | 69.08 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_fcat_1117 | 80.00 | 71.71 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_fcat_1475 | 59.81 | 69.74 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000006742 retrocopies