Parental gene:

Oxct1, ENSDORG00000016318

Aliases:None
Description:3-oxoacid CoA transferase 1 [Source:MGI Symbol;Acc:MGI:1914291]
Organism:Kangaroo rat (Dipodomys ordii)
Coordinates:GeneScaffold_768:42831..161928(-)


>ENSDORG00000016318
ATGACCGCTCTCAAACTGCTCTCCTCTGCGCCAAGGCTCTGCGGCTCCATCCGCAGCTCCCCGAGCGTCTGGTCCAAGGG
GTGTGCCTGCTACTTTTCTGTCAGTGCTCGTCACCATACCAAATTTTATGAAGATCCAATCGAAGCGGTAAAAGATATTC
CCAGTGGCGCAACAGTGCTAGTTGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGTTGACAACTTTGGCCTGGGCCTTTTACTTCACTCTAAGCA
GATAAAACGTATGATCTCTTCGTATGTGGGAGAAAATGCAGAATTTGAACGACAATATTTATCTGGTGAATTAGAAGTAG
AGCTGATACCTCAGGGCACACTTGCAGAGAGGATTCGTGCAGGAGGGGCTGGAGTTCCTGCATTTTACACCAGCACAGGG
TATGGGACCCTGGTACAAGAAGGAGGAGCCCCCATCAAGTACAACACCGACGGCACCATTGCTATTGCCAGTCAGCCACG
AGAGGTAAGGGAGTTTAAAGGGCAGCAGTTTATTTTGGAGGAAGCCATTACAGGAGATTTTGCTTTGGTGAAAGCCTGGA
AAGCAGACCGAGCTGGGAATATAATTTTCAGGAAAACCGCAAGGAATTTCAACTTGCCCATGTGCAAAGCTGCGCGGACC
ACTGTGGTAGAGGTTGAAGAAATTGTAGATGTTGGATCATTTGCTGCAGAAGATATACATGTTCCTAAGATTTATGTGCA
TCGCCTTATAAAGGGAGAAAAATATGAAAAGCGAATTGAACGTTTATCTGTCCGGAAGGAGAAAGATGGACAATCCAAAT
CCAGCAAACCTGGAGCTGATGTGAGGGAACGTATCATCAAGAGGGCAGCTCTTGAATTTGAAGATGGCATGTATGCTAAT
TTGGGCATAGGAATCCCTCTTCTGGCCAGTAACTTTATCAGCCCAGATATGACTGTTCATCTTCAAAGTGAAAATGGCGT
TCTGGGTTTGGGTCCATATCCGATGAAGCATGAAGTTGATGCAGATCTAATCAATGCAGGCAAGGAAACAGTTACTGTTC
TTCCAGGAGCTTCTTTTTTCTCCAGCGATGAATCATTCGCAATGATTAGAGGGGGACATGTCGATCTAACAATGCTAGGA
GCCATGCAGGTTTCCAAATATGGTGACTTGGCTAACTGGATGATACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAATGCACATAAAATCATGG
AGAAATGTACATTACCATTGACTGGAAAGCAATGTGTTGACCGAATTATTACAGAAAAGGCTGTGTTTGATGTGGACAAG
AAGAAGGGGCTTACTCTGATTGAGCTCTGGGAAGGCCTGACAGTGGATGACATAAAGAAGACCACTGGGTGTGATTTTGC
A

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000033186 ortholog_one2one 2 retrogenes
retro_btau_1243, retro_btau_1302,
Equus caballus ENSECAG00000018312 ortholog_one2one 1 retrogene
retro_ecab_511,
Homo sapiens ENSG00000083720 ortholog_one2one 1 retrogene
retro_hsap_14,
Gorilla gorilla ENSGGOG00000025087 ortholog_one2one 1 retrogene
retro_ggor_378,
Myotis lucifugus ENSMLUG00000009431 ortholog_one2many 1 retrogene
retro_mluc_194,
Nomascus leucogenys ENSNLEG00000016656 ortholog_one2one 1 retrogene
retro_nleu_2438,
Oryctolagus cuniculus ENSOCUG00000009231 ortholog_one2one 1 retrogene
retro_ocun_672,
Otolemur garnettii ENSOGAG00000009909 ortholog_one2one 2 retrogenes
retro_ogar_2773, retro_ogar_2781,
Pongo abelii ENSPPYG00000015428 ortholog_one2one 2 retrogenes
retro_pabe_336, retro_pabe_478,
Pan troglodytes ENSPTRG00000016829 ortholog_one2one 1 retrogene
retro_ptro_140,
Rattus norvegicus ENSRNOG00000043094 ortholog_one2one 2 retrogenes
retro_rnor_2177, retro_rnor_2256,
Ictidomys tridecemlineatus ENSSTOG00000008271 ortholog_one2one 1 retrogene
retro_itri_747,
Tarsius syrichta ENSTSYG00000013641 ortholog_one2one 1 retrogene
retro_tsyr_1455,
Tursiops truncatus ENSTTRG00000004331 ortholog_one2one 1 retrogene
retro_ttru_875,
Vicugna pacos ENSVPAG00000002550 ortholog_one2one 1 retrogene
retro_vpac_556,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dord_282 74.69 63.91
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Download FASTA sequences of all ENSDORG00000016318 retrocopies