Parental gene:

MRPL17, ENSCPOG00000027536

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_71:2814903..2815922(+)


>ENSCPOG00000027536
ATGAGGCTGTCTGCGGTATGCGCCATCTCCCACGGTCGCGTGTTCCGCCGACTGGGCCTCGGTCCCGAGTCCCGCATCCA
CCTGTTGCGAAACTTACTCACCGGGCTGGTGCGACACGAGCGCATCGAGGCGACATGGGCGCGTGTGGACGAAATGCGGG
GCTACGCCGAGAAGCTCATTGATTATGGAAAAATGGGAGACACCAACGAACGAGCCATGCGTATGGCTGACTTCTGGCTT
ACAGAGAAAGACTTGATCCCAAAGCTGTTTAAAGTACTGGCCCCTCGGTTCCAAGGTCAGAATGGGGGCTACACAAGGAT
GGTGCAGATCCCAAATCGAAACAAGGAGGATCGGGCAAAGATGGCAGTGATCGAATATAAAGGGAATTGCCTCCCGCCCC
TCCCTGTACCTCAAAGAGACAGCAACCTTACACTTCTAAACCAGCTGCTGCACGGACTTCAGCAGGACCTTCAAAAGAAC
CAAGAAACAAGTGTCCACAGCTCCTATACAGATCAGACACCAAGGATTTAA

Library Parental gene expression (RPM)
SRP017611_liver 17 .54 RPM
SRP017611_kidney 21 .98 RPM
SRP017611_brain 11 .04 RPM
SRP040447_lung 16 .49 RPM
SRP040447_skeletal_muscle 22 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Macropus eugenii ENSMEUG00000013588 ortholog_one2one 1 retrogene
retro_meug_1822,
Myotis lucifugus ENSMLUG00000001144 ortholog_one2one 2 retrogenes
retro_mluc_2368, retro_mluc_679,
Mustela putorius furo ENSMPUG00000005449 ortholog_one2many 1 retrogene
retro_mputfur_125,
Rattus norvegicus ENSRNOG00000019497 ortholog_one2one 1 retrogene
retro_rnor_1979,
Sus scrofa ENSSSCG00000024693 ortholog_one2one 1 retrogene
retro_sscr_217,
Ictidomys tridecemlineatus ENSSTOG00000003313 ortholog_one2one 3 retrogenes
retro_itri_1019, retro_itri_1156, retro_itri_240,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1430 72.22 70.45
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Download FASTA sequences of all ENSCPOG00000027536 retrocopies