Parental gene:

NOP16, ENSCPOG00000026072

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_17:22127063..22133120(-)


>ENSCPOG00000026072
ATGCCAAAGGCCAAGGGCAAGACTCGGAGGCAGAAATTCGGTTATAACATCAACCGAAAGCGCCTGAACCGGAATGCTCG
TCGGAAGGCAGCGCCGCGGATCCAGTGCTCCCATATCCGACATGCGTGGGATCACACCAAATCTGTACGGCAGAACCTGG
CGGAGATGGGTCTGGCCATGGATCCCAACAAGGCGGTTCCCGTCCGTAAGAGAAAGGTGAAAGCCATGGAGGTGGACGTG
GAAGAGAGGCCCAAGGAGCTTGTACGGAAGCCCTATGTACTAAATGACCTGGAAGCTGAGGCCAGCCTCCCAGAAAAGAA
AGGGAATACCTTGTCCCGAGACCTCATCGAGTACGTGCACCACATGGTGGAGAACTATGGGGAAGACTACAAGGCCATGG
CCCGGGATGAGAAGAATTACTATCAAGACACCCCAAAACAGATTCGGAATAAGATCAACGTCTACAAGCGTTTTTACCCA
GAGGAGTGGCAAGCCTTCCTTGATTCTTTGCAGAAGAATAAGATGGAGGTTGAA

Library Parental gene expression (RPM)
SRP017611_liver 16 .02 RPM
SRP017611_kidney 15 .70 RPM
SRP017611_brain 5 .75 RPM
SRP040447_lung 13 .34 RPM
SRP040447_skeletal_muscle 21 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012315 ortholog_one2many 1 retrogene
retro_cjac_2208,
Echinops telfairi ENSETEG00000010391 ortholog_one2many 1 retrogene
retro_etel_1329,
Myotis lucifugus ENSMLUG00000003504 ortholog_one2one 1 retrogene
retro_mluc_2425,
Mustela putorius furo ENSMPUG00000012552 possible_ortholog 1 retrogene
retro_mputfur_381,
Mus musculus ENSMUSG00000025869 ortholog_one2one 2 retrogenes
retro_mmus_3033, retro_mmus_3258,
Rattus norvegicus ENSRNOG00000017284 ortholog_one2many 1 retrogene
retro_rnor_2739,
Sus scrofa ENSSSCG00000029577 ortholog_one2one 1 retrogene
retro_sscr_510,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_129 52.46 65.73
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Download FASTA sequences of all ENSCPOG00000026072 retrocopies