Parental gene:

TIPRL, ENSCPOG00000009945

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_39:5243132..5266078(+)


>ENSCPOG00000009945
ATGATGATCCACGGCTTCCAGAGCAGCCACCAGAACTTCTCCTTCGGGCCCTGGAAGCTGACGGCGGCCAAAACCCACAT
CATGAAGTCAGCAGATGTGGAGAAGTTAGCAGATGAGTTGCATATGCCATCTCTCCCGGAAATGATGTTTGGAGACAACG
TTTTAAGAATCCAGCATGGTTCTGGCTTTGGGATTGAGTTCAATGCTACAGATGCGTTAAAATGCGTAAACAATTACCAA
GGAATGCTTAAAGTAGCTTGTGCTGAAGAGTGGCAGGAAAGCAGGACGGAAGGGGAGCACTCTAAAGAGGTTGTTAAACC
ATATGATTGGACCTATACAACAGATTATAAAGGAACTCTCCTGGGAGACTCTCTTAAATTAAAGGTTGTACCTACAACAG
ATCATATAGATACAGAGAAATTGAAAGCCAGAGAACAGATTAAATTTTTTGAAGAAGTTCTTCTCTTTGAGGATGAACTT
CATGATCATGGAGTTTCAAGTCTGAGCGTGAAAATTAGAGTAATGCCTTCTAGCTTTTTTCTGCTGTTGCGGTTTTTCTT
GAGAATTGATGGGGTGCTTATCAGAATGAATGACACAAGGCTTTACCATGAGGCTGACAAGACCTATATGTTACGAGAAT
ATACTTCACGAGAGAGCAAAATATCTAATTTAACGCATGTTCCACCTTCCCTCTTCACGGAACCTAATGAAATATCACAG
TACTTACCAATAAAGGAAGCAGTTTGTGAGAAGCTAGTATTTCCAGAAAAAGCTGATCCTACCCCTGCAAACTCCCAAGA
AAGCATACCTGTGGAA

Library Parental gene expression (RPM)
SRP017611_liver 14 .28 RPM
SRP017611_kidney 18 .95 RPM
SRP017611_brain 25 .25 RPM
SRP040447_lung 10 .64 RPM
SRP040447_skeletal_muscle 9 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008689 ortholog_one2one 3 retrogenes
retro_chof_1079, retro_chof_1094, retro_chof_1746,
Echinops telfairi ENSETEG00000005808 ortholog_one2one 1 retrogene
retro_etel_1273,
Microcebus murinus ENSMICG00000007808 ortholog_one2one 1 retrogene
retro_mmur_1335,
Myotis lucifugus ENSMLUG00000011927 ortholog_one2one 3 retrogenes
retro_mluc_607, retro_mluc_909, retro_mluc_941,
Monodelphis domestica ENSMODG00000002880 ortholog_one2many 1 retrogene
retro_mdom_180,
Mus musculus ENSMUSG00000040843 ortholog_one2one 1 retrogene
retro_mmus_2653,
Ochotona princeps ENSOPRG00000011313 ortholog_one2one 1 retrogene
retro_opri_885,
Pteropus vampyrus ENSPVAG00000005071 ortholog_one2one 1 retrogene
retro_pvam_257,
Rattus norvegicus ENSRNOG00000003048 ortholog_one2one 1 retrogene
retro_rnor_2197,
Sarcophilus harrisii ENSSHAG00000018932 ortholog_one2one 1 retrogene
retro_shar_771,
Ictidomys tridecemlineatus ENSSTOG00000014921 ortholog_one2one 1 retrogene
retro_itri_1756,
Tupaia belangeri ENSTBEG00000017081 ortholog_one2one 3 retrogenes
retro_tbel_1717, retro_tbel_2833, retro_tbel_3376,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_763 83.92 51.84
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Download FASTA sequences of all ENSCPOG00000009945 retrocopies