Parental gene: | SDAD1, ENSCPOG00000008524 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_5:83404..109660(-) |
>ENSCPOG00000008524
ATGTCCAGCAGACACAACAACAAGCTGCCCAGCAACTTGCCGCAGTTACAGAATCTGATTAAGCGGGACCCGCCGGCCTA
CATCGAAGAGTTTCTCCAGCAGTATAATCACTACCAATCCAATGTGGAGATTTTCAAGTTACAACCAAATAAACCCAGCA
AAGAACTGGCAGAGCTAGTGATGTTTATGGCACAGATTGGTCACTGCTATCCAGAACATCTAAGTAACTTTCCTCAAGAG
CTCAAAGATCTTCTCTCCTATAATCACACAGTCTTAGATTCAGATCTTCGAATGACATTTTGCAAAGCTTTGATCTTGCT
GAGAAATAAGAATCTCATCAGTCCATCAAGTCTGCTGGAACTCTTCTTTGAACTTCTGCGTTGCCATGATAAGCTTCTGC
GAAAGACTTTATACACACATATTGTGGCTGATATTAAGAATATAAATTCAAAACACAAGAACAATAAAGTGAACATAGTA
CTACAGAATTTCATGTACACTATGCTGAGAGATAGCAATGCAACTGCAGCCAAGATGTCTTTGGATGTGATGATTGAGCT
CTACAGAAGGAACATCTGGAATGATGCCAAAACCGTCAATGTTATCACGACGGCGTGCTTCTCTAAGGTCACCAAGATAT
TGGTTGCTGCTCTTACATTTTTCCTTGGGAAAGATGAAGATGAGAAAAAAGATAGCGACTCAGAATCTGAGGAGGAAGGA
CCCACAGCAAGAGACCTGCTCGTGCAATATGCTACAGGGAAGAAAAGTGCCAAAAATAAGAAGAAGTTGGAAAAGGCAAT
GAAAGTGCTCAAGAAACAAAAAAAGAAGAAAAAGCCAGAGGTGTTTAACTTTTCAGCAATTCACTTGATCCATGACCCCC
AAGATTTTGCAGAAAAACTACTCAGGCAGCTAGAGAACTCTAAGGAGAGGTTTGAAGTGAAGATGATGCTTATGAACCTC
ATCTCCAGATTGGTGGGAATCCATGAGCTTTTTCTCTTCAATTTCTACCCCTTTCTCCAAAGGTTTCTGCAGCCCCACCA
GAGAGAAGTAACAAAGATCCTCCTGTTTGCTGCACAAGCATCTCATCATCTTGTACCTCCAGAGATCATTCAGTCATTGC
TTATGACTGTGGCAAACAATTTTGTTACTGACAAGAACTCTGGGGAGGTCATGACAGTAGGTATCAATGCTATAAAGGAG
ATAACAGCTCGGTGTCCTCTAGCCATGACTGAGGAGCTTCTCCAAGACCTGGCTCAATATAAGACCCACAAAGATAAGAA
TGTAATGATGTCTGCTAGAACTTTGATCCAGCTCTTCCGGACGCTGAATCCTCAGATGTTACAGAAAAAATTCCGGGGCA
AACCTACAGAAGCTTCTGTAGAAGCAAGAGTACAAGAATATGGTGAATTAGATGCTAAAGATTACATTCCAGGAGCAGAG
GTTCTGGAAATTGAGAAAGAAGAGGATGCTGAAAATGATGAAGGAGATGGGTGGGAAAGTACCAGTCTCAGTGAAGAGGA
GGAAGCTGATGGTGAATGGGTTGATGTGCACCACTCTTCCGACGAAGAGCAGCAGCAAGAGATTTCCCAGAAACTAAGCA
GCATGGACACGGAGGAGCGGAAGGCCAAGGCTGCAGCTGTCAGCACCAGTCGAGTCTTGACTCAAGAGGACTTCCAGAAA
ATCCGCATGGCCCAAATGAGGAAAGAGCTCGCTGCCGCCCCAGGGAAAGCCCAAAAGAGGAAATACATTGAAATAGACAG
TGACGAGGAGCCCAGGGGTGAATTACTGTCTCTTCGAGACATTGAACGTCTTCATAAAAAACCTAAGTCTGACAAGGAGA
CACGACTAGCAACTGCAATGGCTGGAAAGACAGACCGAAAGGAATTTGTGAGAAAGAAAACCAAAATGAATCCATTTTCC
AGTTCCACAAATAAAGAAAAGAAAAAACAGAAGAACTTTATGATGATGCGATACAGCCAGAATGTTCGGTCCAAAACCAA
ACGGTCCTTCCGAGAAAAGCAGCTAGCACTACGAGATGCACTTTTGAAAAAGAGGAAAAGAATGAAGTAA
ATGTCCAGCAGACACAACAACAAGCTGCCCAGCAACTTGCCGCAGTTACAGAATCTGATTAAGCGGGACCCGCCGGCCTA
CATCGAAGAGTTTCTCCAGCAGTATAATCACTACCAATCCAATGTGGAGATTTTCAAGTTACAACCAAATAAACCCAGCA
AAGAACTGGCAGAGCTAGTGATGTTTATGGCACAGATTGGTCACTGCTATCCAGAACATCTAAGTAACTTTCCTCAAGAG
CTCAAAGATCTTCTCTCCTATAATCACACAGTCTTAGATTCAGATCTTCGAATGACATTTTGCAAAGCTTTGATCTTGCT
GAGAAATAAGAATCTCATCAGTCCATCAAGTCTGCTGGAACTCTTCTTTGAACTTCTGCGTTGCCATGATAAGCTTCTGC
GAAAGACTTTATACACACATATTGTGGCTGATATTAAGAATATAAATTCAAAACACAAGAACAATAAAGTGAACATAGTA
CTACAGAATTTCATGTACACTATGCTGAGAGATAGCAATGCAACTGCAGCCAAGATGTCTTTGGATGTGATGATTGAGCT
CTACAGAAGGAACATCTGGAATGATGCCAAAACCGTCAATGTTATCACGACGGCGTGCTTCTCTAAGGTCACCAAGATAT
TGGTTGCTGCTCTTACATTTTTCCTTGGGAAAGATGAAGATGAGAAAAAAGATAGCGACTCAGAATCTGAGGAGGAAGGA
CCCACAGCAAGAGACCTGCTCGTGCAATATGCTACAGGGAAGAAAAGTGCCAAAAATAAGAAGAAGTTGGAAAAGGCAAT
GAAAGTGCTCAAGAAACAAAAAAAGAAGAAAAAGCCAGAGGTGTTTAACTTTTCAGCAATTCACTTGATCCATGACCCCC
AAGATTTTGCAGAAAAACTACTCAGGCAGCTAGAGAACTCTAAGGAGAGGTTTGAAGTGAAGATGATGCTTATGAACCTC
ATCTCCAGATTGGTGGGAATCCATGAGCTTTTTCTCTTCAATTTCTACCCCTTTCTCCAAAGGTTTCTGCAGCCCCACCA
GAGAGAAGTAACAAAGATCCTCCTGTTTGCTGCACAAGCATCTCATCATCTTGTACCTCCAGAGATCATTCAGTCATTGC
TTATGACTGTGGCAAACAATTTTGTTACTGACAAGAACTCTGGGGAGGTCATGACAGTAGGTATCAATGCTATAAAGGAG
ATAACAGCTCGGTGTCCTCTAGCCATGACTGAGGAGCTTCTCCAAGACCTGGCTCAATATAAGACCCACAAAGATAAGAA
TGTAATGATGTCTGCTAGAACTTTGATCCAGCTCTTCCGGACGCTGAATCCTCAGATGTTACAGAAAAAATTCCGGGGCA
AACCTACAGAAGCTTCTGTAGAAGCAAGAGTACAAGAATATGGTGAATTAGATGCTAAAGATTACATTCCAGGAGCAGAG
GTTCTGGAAATTGAGAAAGAAGAGGATGCTGAAAATGATGAAGGAGATGGGTGGGAAAGTACCAGTCTCAGTGAAGAGGA
GGAAGCTGATGGTGAATGGGTTGATGTGCACCACTCTTCCGACGAAGAGCAGCAGCAAGAGATTTCCCAGAAACTAAGCA
GCATGGACACGGAGGAGCGGAAGGCCAAGGCTGCAGCTGTCAGCACCAGTCGAGTCTTGACTCAAGAGGACTTCCAGAAA
ATCCGCATGGCCCAAATGAGGAAAGAGCTCGCTGCCGCCCCAGGGAAAGCCCAAAAGAGGAAATACATTGAAATAGACAG
TGACGAGGAGCCCAGGGGTGAATTACTGTCTCTTCGAGACATTGAACGTCTTCATAAAAAACCTAAGTCTGACAAGGAGA
CACGACTAGCAACTGCAATGGCTGGAAAGACAGACCGAAAGGAATTTGTGAGAAAGAAAACCAAAATGAATCCATTTTCC
AGTTCCACAAATAAAGAAAAGAAAAAACAGAAGAACTTTATGATGATGCGATACAGCCAGAATGTTCGGTCCAAAACCAA
ACGGTCCTTCCGAGAAAAGCAGCTAGCACTACGAGATGCACTTTTGAAAAAGAGGAAAAGAATGAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 13 .23 RPM |
| SRP017611_kidney | 18 .53 RPM |
| SRP017611_brain | 20 .88 RPM |
| SRP040447_lung | 25 .98 RPM |
| SRP040447_skeletal_muscle | 9 .83 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000198301 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000006441 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000012217 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017503 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000027034 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000026953 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000014852 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000024399 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000022229 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000005270 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_510 | 73.00 | 71.41 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cpor_994 | 93.26 | 51.52 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000008524 retrocopies