Parental gene: | ENSCJAG00000009796 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 7:60458376..60473397(+) |
>ENSCJAG00000009796
ATGGGCTCCGTGTCCAACCAACAGTTTGCAGGTGGCTGCGCCAAGGCGGCAGAAGAGGCGCCGGAGGAGGCGCCGGAGGA
TGCGGCCCGGGCGGCGGACGAGCCTCAGCTGCTGCACGGTGCAGGCATCTGCAAGTGGTTCAACGTGCGCATGGGGTTCG
GCTTCCTGTCCATGACCGCCCGCGCCGGGGTCGCGCTCGACCCCCCAGTGGACGTCTTTGTGCACCAGAGTAAGCTGCAC
ATGGAGGGCTTCCGGAGCTTGAAGGAAGGTGAGGCCGTGGAGTTCACCTTTAAGAAGTCAGCCAAGGGTCTGGAATCCAT
CCGTGTCACTGGACCTGGTGGGGTGTTCTGTATTGGGAGTGAGAGGCGGCCAAAGGGGAAGAACATGCAGAAGCGCAGAT
CAAAAGGAGACAGGTGCTACAACTGTGGAGGTCTAGACCATCATGCCAAGGAATGCAAGCTGCCACCCCAGCCCAAGAAG
TGCCACTTCTGCCAGAGCATCAGCCATATGGTAGCCTCATGTCCACTGAAGGCCCAGCAGGCCCCTAGCGCACAGGGAAA
GCCAACATACTTTCGGGAGGAAGAAGAAGAAATCCACAGCCCTACCCTGCTCCCGGAGGCCCAGAATTGA
ATGGGCTCCGTGTCCAACCAACAGTTTGCAGGTGGCTGCGCCAAGGCGGCAGAAGAGGCGCCGGAGGAGGCGCCGGAGGA
TGCGGCCCGGGCGGCGGACGAGCCTCAGCTGCTGCACGGTGCAGGCATCTGCAAGTGGTTCAACGTGCGCATGGGGTTCG
GCTTCCTGTCCATGACCGCCCGCGCCGGGGTCGCGCTCGACCCCCCAGTGGACGTCTTTGTGCACCAGAGTAAGCTGCAC
ATGGAGGGCTTCCGGAGCTTGAAGGAAGGTGAGGCCGTGGAGTTCACCTTTAAGAAGTCAGCCAAGGGTCTGGAATCCAT
CCGTGTCACTGGACCTGGTGGGGTGTTCTGTATTGGGAGTGAGAGGCGGCCAAAGGGGAAGAACATGCAGAAGCGCAGAT
CAAAAGGAGACAGGTGCTACAACTGTGGAGGTCTAGACCATCATGCCAAGGAATGCAAGCTGCCACCCCAGCCCAAGAAG
TGCCACTTCTGCCAGAGCATCAGCCATATGGTAGCCTCATGTCCACTGAAGGCCCAGCAGGCCCCTAGCGCACAGGGAAA
GCCAACATACTTTCGGGAGGAAGAAGAAGAAATCCACAGCCCTACCCTGCTCCCGGAGGCCCAGAATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 0 .02 RPM |
| SRP051959_skeletal_muscle | 0 .00 RPM |
| SRP051959_lymph_node | 0 .00 RPM |
| SRP051959_lung | 0 .00 RPM |
| SRP051959_liver | 0 .00 RPM |
| SRP051959_kidney | 0 .00 RPM |
| SRP051959_heart | 0 .00 RPM |
| SRP051959_colon | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000010582 | ortholog_many2many | 2 retrogenes | |
| Bos taurus | ENSBTAG00000040497 | ortholog_many2many | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000012488 | ortholog_one2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000019646 | ortholog_many2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000010710 | ortholog_one2many | 5 retrogenes | |
| Equus caballus | ENSECAG00000020267 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000131914 | ortholog_one2many | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000024918 | ortholog_one2many | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000010158 | ortholog_many2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009294 | ortholog_one2many | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000000299 | ortholog_many2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003971 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001684 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000000384 | ortholog_one2many | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000017267 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000038409 | ortholog_one2many | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000003557 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000004329 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000005678 | ortholog_one2many | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_33 | 90.91 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_186 | 93.78 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_1468 | 93.78 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_1784 | 90.43 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cjac_2597 | 72.46 | 97.13 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000009796 retrocopies