Parental gene: | ENSCHOG00000003841 |
| Aliases: | None |
| Description: | None |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_6131:2234..9197(-) |
>ENSCHOG00000003841
TGCAAAATTCAAAATGGGGCTCAAGGTATTCGTTTCATCTACACCAGAGAAGGCAGACCAAGTGGCGAGGCTTTTGTTGA
ACTTGAATCAGAAGATGAAGTCAAGTTGGCCCTGAAAAAAGACAGAGAAACTATGGGACACAGATATGTTGAAGTATTCA
AGTCAAACAACGTTGAAATGGATTGGGTGTTGAAGCATACTGGTCCAAATAGTCCTGACACGGCCAATGATGGCTTTGTG
CGTCTTAGAGGACTCCCCTTTGGATGTAGCAAGGAAGAGATTGTTCAGTTCTTCTCAGGGTTGGAAATCGTGCCAAATGG
GATAACATTGCCGGTGGACTTCCAGGGGAGGAGTACGGGGGAGGCCTTCGTGCAGTTTGCTTCACAGGAAATAGCTGAAA
AGGCTCTAAAGAAACACAAGGAAAGAATAGGGCACAGGTATATCGAGATCTTTAAGAGCAGTCGAGCTGAAGTTAGAACT
CACTATGATCCTCCGAGGAAGCTCATGGCCATGCAGAGGCCGGGCCCCTATGACAGGCCTGGGGCCGGCAGAGGGTATAA
CAGTATCGGCAGAGGGGCTGGCTTTGAAAGGATGAGACGTGGCGCCTACGGCGGAGGCTATGGAGGCTATGATGATTATA
ATGGCTATAATGATGGCTATGGATTTGGGTCGGATAGATTTGGAAGAGACCTCAATTATTGTTTTTCAGGAATGTCTGAT
CACAGATACGGGGATGGCAGCTCTACTTTCCAGAGCACAACGGGACACTGTGTACACATGCGTGGATTACCTTACAGAGC
CACCGAGAATGACATTTACAACTTTTTCTCACCGCTCAATCCTGTGAGAGTACACATTGAAATTGGTCCTGATGGCAGAG
TGACTGGAGAGGCAGATGTTGAGTTTGCTACTCATGAAGATGCTGTGGCAGCTATGTCAAAAGACAAAGCAAATATGCAG
CACAGATACGTAGAGCTCTTCTTGAATTCTACAGCAGGGGCAAGCGGCGGTGCTTACGAGCACAGATACGTAGAGCTCTT
CTTGAATTCTACAGCAGGGGCAAGCAGTGGTGCTTATGGTAGCCAGATGATGGGAGGCATGGGCTTGTCGAACCAGTCCA
GTTATGGAGGCCCGGCCAGCCAGCAGCTGAGCGGCGGCTACGGAGGCGGCTATGGTGGCCAGAGCAGCATGAGTGGATAC
GGTGGCCAAGGAGCCGGGGACAGCAGCTGCTACAGCAGTGGAAGCCGCGTGGCCGTGGGAGTGAACGGAATGGGGGGGGT
GTCGGGCATGTCCAGTGTGAGCGGGGGGTGGGGGGTGTAA
TGCAAAATTCAAAATGGGGCTCAAGGTATTCGTTTCATCTACACCAGAGAAGGCAGACCAAGTGGCGAGGCTTTTGTTGA
ACTTGAATCAGAAGATGAAGTCAAGTTGGCCCTGAAAAAAGACAGAGAAACTATGGGACACAGATATGTTGAAGTATTCA
AGTCAAACAACGTTGAAATGGATTGGGTGTTGAAGCATACTGGTCCAAATAGTCCTGACACGGCCAATGATGGCTTTGTG
CGTCTTAGAGGACTCCCCTTTGGATGTAGCAAGGAAGAGATTGTTCAGTTCTTCTCAGGGTTGGAAATCGTGCCAAATGG
GATAACATTGCCGGTGGACTTCCAGGGGAGGAGTACGGGGGAGGCCTTCGTGCAGTTTGCTTCACAGGAAATAGCTGAAA
AGGCTCTAAAGAAACACAAGGAAAGAATAGGGCACAGGTATATCGAGATCTTTAAGAGCAGTCGAGCTGAAGTTAGAACT
CACTATGATCCTCCGAGGAAGCTCATGGCCATGCAGAGGCCGGGCCCCTATGACAGGCCTGGGGCCGGCAGAGGGTATAA
CAGTATCGGCAGAGGGGCTGGCTTTGAAAGGATGAGACGTGGCGCCTACGGCGGAGGCTATGGAGGCTATGATGATTATA
ATGGCTATAATGATGGCTATGGATTTGGGTCGGATAGATTTGGAAGAGACCTCAATTATTGTTTTTCAGGAATGTCTGAT
CACAGATACGGGGATGGCAGCTCTACTTTCCAGAGCACAACGGGACACTGTGTACACATGCGTGGATTACCTTACAGAGC
CACCGAGAATGACATTTACAACTTTTTCTCACCGCTCAATCCTGTGAGAGTACACATTGAAATTGGTCCTGATGGCAGAG
TGACTGGAGAGGCAGATGTTGAGTTTGCTACTCATGAAGATGCTGTGGCAGCTATGTCAAAAGACAAAGCAAATATGCAG
CACAGATACGTAGAGCTCTTCTTGAATTCTACAGCAGGGGCAAGCGGCGGTGCTTACGAGCACAGATACGTAGAGCTCTT
CTTGAATTCTACAGCAGGGGCAAGCAGTGGTGCTTATGGTAGCCAGATGATGGGAGGCATGGGCTTGTCGAACCAGTCCA
GTTATGGAGGCCCGGCCAGCCAGCAGCTGAGCGGCGGCTACGGAGGCGGCTATGGTGGCCAGAGCAGCATGAGTGGATAC
GGTGGCCAAGGAGCCGGGGACAGCAGCTGCTACAGCAGTGGAAGCCGCGTGGCCGTGGGAGTGAACGGAATGGGGGGGGT
GTCGGGCATGTCCAGTGTGAGCGGGGGGTGGGGGGTGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000008888 | possible_ortholog | 2 retrogenes | |
| Bos taurus | ENSBTAG00000009389 | possible_ortholog | 1 retrogene | |
| Bos taurus | ENSBTAG00000020513 | possible_ortholog | 1 retrogene | |
| Canis familiaris | ENSCAFG00000000336 | possible_ortholog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000009931 | possible_ortholog | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000001485 | possible_ortholog | 5 retrogenes | |
| Dipodomys ordii | ENSDORG00000005453 | possible_ortholog | 1 retrogene | |
| Equus caballus | ENSECAG00000014429 | possible_ortholog | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000010991 | possible_ortholog | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000013364 | possible_ortholog | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000011303 | possible_ortholog | 1 retrogene | |
| Felis catus | ENSFCAG00000001204 | possible_ortholog | 2 retrogenes | |
| Homo sapiens | ENSG00000169045 | possible_ortholog | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000025844 | possible_ortholog | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000015766 | possible_ortholog | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000016625 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000010843 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009436 | ortholog_one2one | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000000693 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000007850 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000026658 | possible_ortholog | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000012631 | possible_ortholog | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000003513 | possible_ortholog | 1 retrogene | |
| Procavia capensis | ENSPCAG00000006715 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000016121 | possible_ortholog | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000007670 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000003399 | possible_ortholog | 1 retrogene | |
| Sorex araneus | ENSSARG00000003024 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000018204 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000014022 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000016376 | possible_ortholog | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000007485 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_1051 | 56.36 | 53.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_1235 | 91.25 | 67.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_1491 | 67.80 | 53.53 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_2650 | 72.48 | 57.63 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000003841 retrocopies