Parental gene: | HINT1, ENSBTAG00000010959 |
| Aliases: | None |
| Description: | Histidine triad nucleotide-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P62958] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 7:24515177..24521784(+) |
>ENSBTAG00000010959
ATGGCAGATGAGATCGCCAAGGCTCAGGTCGCCCGGCCTGGCGGCGACACGATCTTCGGGAAGATCATTCGCAAGGAAAT
CCCAGCCAAAATCATTTATGAGGATGACCAGTGTCTTGCTTTCCATGACATTTCCCCTCAAGCACCAACACATTTTCTGG
TGATACCCAAGAAATATATATCTCAGATTTCTGCAGCAGAAGATGATGATGAAAGTCTTCTTGGGCATTTGATGATTGTT
GGCAAGAAATGTGCTGCTGATCTGGGCCTGAAGAAGGGCTATCGAATGGTGGTGAATGAAGGTTCAGATGGGGGCCAGTC
TGTCTATCATGTTCATCTCCATGTTCTTGGAGGTCGGCAGATGAACTGGCCTCCTGGTTAA
ATGGCAGATGAGATCGCCAAGGCTCAGGTCGCCCGGCCTGGCGGCGACACGATCTTCGGGAAGATCATTCGCAAGGAAAT
CCCAGCCAAAATCATTTATGAGGATGACCAGTGTCTTGCTTTCCATGACATTTCCCCTCAAGCACCAACACATTTTCTGG
TGATACCCAAGAAATATATATCTCAGATTTCTGCAGCAGAAGATGATGATGAAAGTCTTCTTGGGCATTTGATGATTGTT
GGCAAGAAATGTGCTGCTGATCTGGGCCTGAAGAAGGGCTATCGAATGGTGGTGAATGAAGGTTCAGATGGGGGCCAGTC
TGTCTATCATGTTCATCTCCATGTTCTTGGAGGTCGGCAGATGAACTGGCCTCCTGGTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 21 .47 RPM |
| SRP017611_kidney | 71 .66 RPM |
| SRP017611_liver | 22 .43 RPM |
| ERP005899_muscle | 79 .71 RPM |
| ERP005899_liver | 34 .97 RPM |
| SRP030211_testis | 39 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017774 | ortholog_one2one | 4 retrogenes | |
| Bos taurus | ENSBTAG00000011444 | within_species_paralog | 1 retrogene | |
| Canis familiaris | ENSCAFG00000032152 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000014398 | possible_ortholog | 3 retrogenes | |
| Echinops telfairi | ENSETEG00000010127 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000011967 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000005368 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000001091 | ortholog_one2many | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000028727 | ortholog_one2many | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000011639 | ortholog_one2many | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000006607 | possible_ortholog | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000000622 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000005834 | ortholog_one2many | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000014264 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000027920 | ortholog_one2many | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000008653 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_926 | 89.84 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_978 | 87.10 | 98.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_btau_1036 | 69.15 | 73.81 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_btau_1149 | 76.38 | 99.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_btau_1782 | 98.39 | 98.41 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000010959 retrocopies