Parental gene:

FKBP1A, ENSBTAG00000008303

Aliases:FKBP1A, FKBP1B
Description:Peptidyl-prolyl cis-trans isomerase FKBP1A [Source:UniProtKB/Swiss-Prot;Acc:P18203]
Organism:Cow (Bos taurus)
Coordinates:13:60276501..60303755(+)


>ENSBTAG00000008303
ATGGGAGTGCAGGTGGAGACCATCTCTCCCGGAGACGGGCGCACCTTCCCGAAGCGTGGCCAGACCTGCGTGGTGCACTA
CACGGGGATGCTTGAAGATGGAAAGAAATTCGATTCCTCCCGGGACAGAAACAAGCCCTTTAAGTTTGTGCTGGGCAAGC
AGGAGGTGATCCGAGGCTGGGAAGAAGGGGTTGCCCAGATGAGTGTGGGTCAGAGAGCCAAGCTGACTATCTCCCCAGAC
TATGCCTATGGTGCCACTGGCCACCCAGGCATCATCCCACCAAATGCCACTCTCATCTTTGACGTGGAACTTCTAAAACT
GGAATGA

Library Parental gene expression (RPM)
SRP017611_brain 173 .86 RPM
SRP017611_kidney 186 .11 RPM
SRP017611_liver 85 .85 RPM
ERP005899_muscle 132 .45 RPM
ERP005899_liver 117 .01 RPM
SRP030211_testis 103 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000007605 within_species_paralog 1 retrogene
retro_btau_561,
Callithrix jacchus ENSCJAG00000020908 ortholog_one2many 4 retrogenes
retro_cjac_1544, retro_cjac_3889, retro_cjac_4157, retro_cjac_537,
Ciona savignyi ENSCSAVG00000006859 ortholog_many2many 1 retrogene
retro_csav_11,
Dasypus novemcinctus ENSDNOG00000005868 ortholog_one2many 16 retrogenes
retro_dnov_1289, retro_dnov_1577, retro_dnov_1666, retro_dnov_2236, retro_dnov_228, retro_dnov_2404, retro_dnov_2418, retro_dnov_2544, retro_dnov_2589, retro_dnov_263, retro_dnov_584, retro_dnov_621, retro_dnov_670, retro_dnov_684, retro_dnov_707, retro_dnov_937,
Echinops telfairi ENSETEG00000007454 ortholog_one2many 1 retrogene
retro_etel_2059,
Felis catus ENSFCAG00000026097 ortholog_one2many 2 retrogenes
retro_fcat_168, retro_fcat_751,
Homo sapiens ENSG00000088832 ortholog_many2many 1 retrogene
retro_hsap_1198,
Gorilla gorilla ENSGGOG00000001729 ortholog_many2many 3 retrogenes
retro_ggor_1494, retro_ggor_2344, retro_ggor_933,
Macaca mulatta ENSMMUG00000015996 ortholog_many2many 1 retrogene
retro_mmul_10,
Monodelphis domestica ENSMODG00000019554 ortholog_many2many 2 retrogenes
retro_mdom_151, retro_mdom_733,
Mustela putorius furo ENSMPUG00000017946 ortholog_one2many 1 retrogene
retro_mputfur_1649,
Mus musculus ENSMUSG00000032966 ortholog_one2many 1 retrogene
retro_mmus_1293,
Nomascus leucogenys ENSNLEG00000009356 ortholog_one2many 5 retrogenes
retro_nleu_2009, retro_nleu_2628, retro_nleu_2728, retro_nleu_2730, retro_nleu_604,
Otolemur garnettii ENSOGAG00000002629 ortholog_one2many 1 retrogene
retro_ogar_673,
Procavia capensis ENSPCAG00000008816 ortholog_one2many 2 retrogenes
retro_pcap_289, retro_pcap_37,
Pongo abelii ENSPPYG00000010852 ortholog_one2many 5 retrogenes
retro_pabe_1654, retro_pabe_1686, retro_pabe_2364, retro_pabe_2365, retro_pabe_998,
Pan troglodytes ENSPTRG00000013163 ortholog_one2many 2 retrogenes
retro_ptro_2983, retro_ptro_818,
Pteropus vampyrus ENSPVAG00000013840 ortholog_one2many 1 retrogene
retro_pvam_1367,
Rattus norvegicus ENSRNOG00000008822 ortholog_one2many 1 retrogene
retro_rnor_453,
Sus scrofa ENSSSCG00000007188 ortholog_one2many 1 retrogene
retro_sscr_98,
Tursiops truncatus ENSTTRG00000003547 ortholog_one2many 3 retrogenes
retro_ttru_1227, retro_ttru_802, retro_ttru_904,
Vicugna pacos ENSVPAG00000011511 ortholog_one2many 1 retrogene
retro_vpac_171,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_128 91.67 100.00
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2. retro_btau_1220 97.22 100.00
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3. retro_btau_1265 92.59 100.00
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4. retro_btau_1760 67.68 89.81
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Download FASTA sequences of all ENSBTAG00000008303 retrocopies