Parental gene: | ENSDNOG00000005868 |
| Aliases: | None |
| Description: | None |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_894:48039..63915(-) |
>ENSDNOG00000005868
GTGCACAAGCGACGGGCGGAGGGACGAGGTAGAGCCGCGGAGCTGCCGCCAGGTCGCTGTTGGTCCACGCCGCCCGCCGC
GTCCGCCGCCGCCATGGGAGTGCAGGTGGAGACCATCTCCCCCGGAGACGGGCGCACCTTCCCGAAGCGCGGCCAGACCT
GCGTGGTGCACTACACGGGGATGCTTGAAGATGGAAAGAAATTTGATTCCTCTCGGGACAGAAACAAGCCCTTTAAATTT
ACACTAGGCAAGCAGGAGGTGATCCGAGGCTGGGAAGAAGGGGTTGCCCAG
GTGCACAAGCGACGGGCGGAGGGACGAGGTAGAGCCGCGGAGCTGCCGCCAGGTCGCTGTTGGTCCACGCCGCCCGCCGC
GTCCGCCGCCGCCATGGGAGTGCAGGTGGAGACCATCTCCCCCGGAGACGGGCGCACCTTCCCGAAGCGCGGCCAGACCT
GCGTGGTGCACTACACGGGGATGCTTGAAGATGGAAAGAAATTTGATTCCTCTCGGGACAGAAACAAGCCCTTTAAATTT
ACACTAGGCAAGCAGGAGGTGATCCGAGGCTGGGAAGAAGGGGTTGCCCAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 31 .89 RPM |
| SRP012922_cerebellum | 14 .57 RPM |
| SRP012922_heart | 10 .67 RPM |
| SRP012922_kidney | 12 .32 RPM |
| SRP012922_liver | 11 .15 RPM |
| SRP012922_lung | 27 .49 RPM |
| SRP012922_quadricep_muscle | 10 .56 RPM |
| SRP012922_spleen | 38 .92 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000008303 | ortholog_one2many | 4 retrogenes | |
| Ciona savignyi | ENSCSAVG00000006859 | ortholog_many2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000004678 | within_species_paralog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000011244 | within_species_paralog | 1 retrogene | |
| Homo sapiens | ENSG00000088832 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001729 | possible_ortholog | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000015996 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000019554 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000032966 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000008816 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000008822 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000007188 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000003547 | ortholog_one2one | 3 retrogenes | |
| Vicugna pacos | ENSVPAG00000011511 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_228 | 73.24 | 72.16 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_263 | 79.17 | 72.16 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_584 | 75.58 | 84.54 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_621 | 55.88 | 69.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_670 | 86.81 | 89.69 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_dnov_684 | 62.77 | 96.91 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_dnov_707 | 73.24 | 72.16 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_dnov_937 | 58.33 | 95.88 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_dnov_1289 | 71.21 | 67.01 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_dnov_1577 | 54.17 | 74.23 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_dnov_1666 | 90.28 | 73.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_dnov_2236 | 63.74 | 92.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_dnov_2404 | 64.71 | 69.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_dnov_2418 | 72.37 | 76.29 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_dnov_2544 | 55.67 | 97.94 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_dnov_2589 | 64.38 | 74.23 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000005868 retrocopies