Parental gene: | FKBP1A, ENSPPYG00000010852 |
| Aliases: | None |
| Description: | FK506 binding protein 1A, 12kDa [Source:HGNC Symbol;Acc:3711] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 20:26995519..27020014(+) |
>ENSPPYG00000010852
ATGGGAGTGCAGGTGGAAACCATCTCCCCAGGAGACGGGCGCACCTTCCCGAAGCGCGGCCAGACCTGCGTGGTGCACTA
CACCGGGATGCTTGAAGATGGAAAGAAATTTGATTCCTCCCGGGACAGAAACAAGCCCTTTAAGTTTATGCTAGGCAAGC
AGGAGGTGATCCGAGGCTGGGAAGAAGGGGTTGCCCAGATGAGTGTGGGTCAGAGAGCCAAACTGACTATATCTCCAGAT
TATGCCTATGGTGCCACTGGGCACCCAGGCATCATCCCACCACATGCCACTCTCGTCTTCGATGTGGAGCTTCTAAAACT
GGAATGA
ATGGGAGTGCAGGTGGAAACCATCTCCCCAGGAGACGGGCGCACCTTCCCGAAGCGCGGCCAGACCTGCGTGGTGCACTA
CACCGGGATGCTTGAAGATGGAAAGAAATTTGATTCCTCCCGGGACAGAAACAAGCCCTTTAAGTTTATGCTAGGCAAGC
AGGAGGTGATCCGAGGCTGGGAAGAAGGGGTTGCCCAGATGAGTGTGGGTCAGAGAGCCAAACTGACTATATCTCCAGAT
TATGCCTATGGTGCCACTGGGCACCCAGGCATCATCCCACCACATGCCACTCTCGTCTTCGATGTGGAGCTTCTAAAACT
GGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 176 .54 RPM |
| SRP007412_cerebellum | 64 .69 RPM |
| SRP007412_heart | 46 .15 RPM |
| SRP007412_kidney | 83 .66 RPM |
| SRP007412_liver | 80 .67 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000008303 | ortholog_one2many | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000020908 | ortholog_one2one | 4 retrogenes | |
| Ciona savignyi | ENSCSAVG00000006859 | ortholog_many2many | 1 retrogene | |
| Homo sapiens | ENSG00000088832 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001729 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000015996 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000019554 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000002629 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004149 | within_species_paralog | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000012604 | within_species_paralog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000013163 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000007188 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000003547 | ortholog_one2one | 3 retrogenes | |
| Vicugna pacos | ENSVPAG00000011511 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_998 | 82.24 | 99.07 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1654 | 87.04 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_1686 | 86.24 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_2364 | 87.16 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_2365 | 87.16 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000010852 retrocopies