Parental gene: | TRA2B, ENSBTAG00000001697 |
| Aliases: | TRA2B, SFRS10 |
| Description: | Transformer-2 protein homolog beta [Source:UniProtKB/Swiss-Prot;Acc:Q3ZBT6] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 1:81878690..81898384(+) |
>ENSBTAG00000001697
ATGAGCGACAGCGGCGAGCAGAACTACGGAGAGCGGGAATCCCGTTCTGCTTCCAGAAGTGGAAGTGCTCATGGATCTGG
GAAATCTGCAAGGCATACCCCTGCAAGGTCTCGCTCCAAGGAAGATTCCAGGCGTTCCAGATCAAAGTCCAGGTCCAGAT
CTGAATCTAGGTCTAGATCCAGAAGAAGTTCTCGGAGGCATTATACAAGGTCACGATCTCGGTCCCGGTCCCATAGAAGA
TCTCGTAGCAGATCTTACAGCAGAGATTATCGAAGACGGCATAGCCACAGTCATTCTCCCATGTCTACCCGCCGGCGTCA
TGTTGGGAATCGGGCAAATCCTGATCCCAACTGTTGTCTTGGAGTATTTGGATTGAGCTTGTACACTACAGAAAGAGATC
TAAGAGAAGTGTTCTCTAAATATGGCCCAATTGCTGATGTATCTATTGTATATGACCAGCAATCTAGACGTTCAAGAGGA
TTTGCCTTTGTATACTTTGAAAATGTAGATGATGCCAAGGAAGCAAAAGAGCGTGCCAATGGAATGGAGCTTGATGGACG
TAGGATCAGAGTTGACTTCTCCATAACGAAAAGACCACATACTCCAACACCAGGAATTTACATGGGGAGACCTACCTATG
GCAGCTCACGCCGTCGAGATTACTATGACAGAGGATATGATCGAGGCTATGATGATCGGGACTATTATAGCAGATCGTAC
AGGGGTGGAGGAGGAGGAGGGGGAGGATGGAGAGCTGCTCAAGACAGGGATCAGATATACAGAAGACGGTCACCTTCTCC
CTACTATAGTCGTGGAGGATACAGATCACGTTCCAGATCTCGATCATACTCACCTCGTCGCTATTAA
ATGAGCGACAGCGGCGAGCAGAACTACGGAGAGCGGGAATCCCGTTCTGCTTCCAGAAGTGGAAGTGCTCATGGATCTGG
GAAATCTGCAAGGCATACCCCTGCAAGGTCTCGCTCCAAGGAAGATTCCAGGCGTTCCAGATCAAAGTCCAGGTCCAGAT
CTGAATCTAGGTCTAGATCCAGAAGAAGTTCTCGGAGGCATTATACAAGGTCACGATCTCGGTCCCGGTCCCATAGAAGA
TCTCGTAGCAGATCTTACAGCAGAGATTATCGAAGACGGCATAGCCACAGTCATTCTCCCATGTCTACCCGCCGGCGTCA
TGTTGGGAATCGGGCAAATCCTGATCCCAACTGTTGTCTTGGAGTATTTGGATTGAGCTTGTACACTACAGAAAGAGATC
TAAGAGAAGTGTTCTCTAAATATGGCCCAATTGCTGATGTATCTATTGTATATGACCAGCAATCTAGACGTTCAAGAGGA
TTTGCCTTTGTATACTTTGAAAATGTAGATGATGCCAAGGAAGCAAAAGAGCGTGCCAATGGAATGGAGCTTGATGGACG
TAGGATCAGAGTTGACTTCTCCATAACGAAAAGACCACATACTCCAACACCAGGAATTTACATGGGGAGACCTACCTATG
GCAGCTCACGCCGTCGAGATTACTATGACAGAGGATATGATCGAGGCTATGATGATCGGGACTATTATAGCAGATCGTAC
AGGGGTGGAGGAGGAGGAGGGGGAGGATGGAGAGCTGCTCAAGACAGGGATCAGATATACAGAAGACGGTCACCTTCTCC
CTACTATAGTCGTGGAGGATACAGATCACGTTCCAGATCTCGATCATACTCACCTCGTCGCTATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 42 .94 RPM |
| SRP017611_kidney | 69 .70 RPM |
| SRP017611_liver | 40 .70 RPM |
| ERP005899_muscle | 87 .15 RPM |
| ERP005899_liver | 81 .25 RPM |
| SRP030211_testis | 123 .47 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000013308 | within_species_paralog | 1 retrogene | |
| Bos taurus | ENSBTAG00000025848 | within_species_paralog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000005781 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000003157 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000022858 | ortholog_one2one | 6 retrogenes | |
| Ochotona princeps | ENSOPRG00000007990 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000001783 | ortholog_one2one | 4 retrogenes | |
| Tarsius syrichta | ENSTSYG00000000388 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_850 | 63.45 | 65.62 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_1245 | 63.53 | 57.99 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000001697 retrocopies