Parental gene:

ENSVPAG00000008068

Aliases:None
Description:None
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_2162:124744..131567(+)


>ENSVPAG00000008068
GAATTCTCAACATCTGGTTCATCTAATACAGACACTGGTAAAGTTACTGGGACCTTGGAGACCAAATATAAATGGTGTGA
GTATGGCCTGACTTTCACAGAAAAGTGGAACACTGATAACACTCTGGGAACAGAAATCGCAATCGAAGACCAGATTTGTC
AAGGTTTGAAACTGACATTTGATACCACCTTTTCACCAAACACGGGAAAGAAAAGTGGTAAAATCAAGTCATCTTACAAG
AGGGAGTGTATAAACCTTGGTTGTGATGTTGACTTTGATTTTGCTGGACCTGCAATCCATGGTTCAGCTGTCTTTGGTTA
TGAGGGCTGGCTTGCTGGGTACCAGATGACCTTTGACAGTGCCAAGTCAAAGCTGACAAGGAATAACTTTGCAGTGGGCT
ACAGGACTGGGGACTTCCAGCTACACACTAATGTCAATGATGGGACAGAATTTGGAGGATCAATTTACCAGAAAGTGTGT
GAAGATCTTGACACTTCAGTAAACCTTGCTTGGACATCAGGAACCAACTGCACTCGCTTTGGCATTGCCGCTAAGTATCA
GTTGGATCCCACTGCTTCCATTTCTGCAAAAGTAAACAACTCTAGTTTAATTGGAGTGGGCTATACTCAGACTCTGAGGC
CTGGTGTGAAGCTTACACTGTCTGCTCTGGTAGATGGGAAGAGCATTAACGCTGGAGGCCACAAACTTGGGCCCTGGAGT
TGGAGGCTTAATCTAGCTGAAAGAAACCTCTGGGAATGGATATTAGAAGATTTGGCCTTAATATATTTCCAGTGTGACCA
GCAGGCTTTTCCCCCCCAAGAAGGTGATCAAAACAAAGGATGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012975 possible_ortholog 2 retrogenes
retro_btau_1252, retro_btau_1389,
Canis familiaris ENSCAFG00000015398 possible_ortholog 1 retrogene
retro_cfam_376,
Callithrix jacchus ENSCJAG00000001145 possible_ortholog 1 retrogene
retro_cjac_2385,
Erinaceus europaeus ENSEEUG00000008623 possible_ortholog 2 retrogenes
retro_eeur_192, retro_eeur_343,
Felis catus ENSFCAG00000026943 possible_ortholog 3 retrogenes
retro_fcat_1385, retro_fcat_804, retro_fcat_815,
Homo sapiens ENSG00000165637 possible_ortholog 1 retrogene
retro_hsap_2114,
Gorilla gorilla ENSGGOG00000005861 possible_ortholog 5 retrogenes
retro_ggor_1677, retro_ggor_1949, retro_ggor_2934, retro_ggor_3036, retro_ggor_425,
Macropus eugenii ENSMEUG00000012995 ortholog_one2one 1 retrogene
retro_meug_30,
Microcebus murinus ENSMICG00000017815 ortholog_one2one 1 retrogene
retro_mmur_191,
Myotis lucifugus ENSMLUG00000007500 possible_ortholog 2 retrogenes
retro_mluc_1710, retro_mluc_2252,
Macaca mulatta ENSMMUG00000008691 ortholog_one2one 1 retrogene
retro_mmul_2200,
Mustela putorius furo ENSMPUG00000003268 possible_ortholog 1 retrogene
retro_mputfur_354,
Mus musculus ENSMUSG00000021771 possible_ortholog 1 retrogene
retro_mmus_2667,
Nomascus leucogenys ENSNLEG00000016857 possible_ortholog 1 retrogene
retro_nleu_1608,
Otolemur garnettii ENSOGAG00000030039 possible_ortholog 1 retrogene
retro_ogar_2116,
Rattus norvegicus ENSRNOG00000013505 possible_ortholog 1 retrogene
retro_rnor_2652,
Sorex araneus ENSSARG00000011194 possible_ortholog 2 retrogenes
retro_sara_300, retro_sara_59,
Sarcophilus harrisii ENSSHAG00000012048 possible_ortholog 1 retrogene
retro_shar_325,
Sus scrofa ENSSSCG00000010320 possible_ortholog 2 retrogenes
retro_sscr_681, retro_sscr_791,
Tupaia belangeri ENSTBEG00000001946 possible_ortholog 4 retrogenes
retro_tbel_1504, retro_tbel_1541, retro_tbel_1885, retro_tbel_4597,
Tarsius syrichta ENSTSYG00000004764 ortholog_one2one 1 retrogene
retro_tsyr_14,
Tursiops truncatus ENSTTRG00000000371 ortholog_one2one 3 retrogenes
retro_ttru_116, retro_ttru_1172, retro_ttru_776,
Vicugna pacos ENSVPAG00000010448 within_species_paralog 1 retrogene
retro_vpac_38,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_156 82.07 51.43
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSVPAG00000008068 retrocopies