Parental gene:

CKAP2, ENSTTRG00000009624

Aliases:None
Description:cytoskeleton associated protein 2 [Source:HGNC Symbol;Acc:1990]
Organism:Dolphin (Tursiops truncatus)
Coordinates:scaffold_86883:16298..29858(-)


>ENSTTRG00000009624
ATGAGCACCCCAGCCGTGCCCCAGGACCTGCAGCTGCCCCCGAGTCAGAGGGCCCAGTCCGCGTTCAGAGAGCAAAGAAG
ACAAAAACTCAAGGAGCATCTGTTAAAAAGAAAAACTTTTTTTGCATACAAACAGGAGAATCAGATATTATCCAGTGATA
GAGACCAGAGAGTGAGGATATCTGAAGGCCAGATCCAAGAAGAGACAAAAGTTCTGGAACTTAAGGCAAAAATGACTGAT
AAAGAGAATGTCGGTAGACCTACTGGGATCAAGAATAGTATAACAATGGAAAAAAACTGTATTCCTTTAAAACCTTGTAA
TGAATTAACCAATTCAACTACAGCAGTTGATACACCTAATTTTGAGGATAATAATCAAACTCTGCCATTGTTACCAATTA
AAGATGACCCCCAAAGTCAACATATGACGTTAAGCCAAGCATTTCACCTTAAAAACAACAGTAAAAAGAAACAAATGACT
ACAGAAAAACCAAAGCAAGATGCGAACATGCCCAAGAAACCTGTGCTTGGATCTTATCGTGGCCAAATTGTTCAGTCTAA
GATTAATTCCTTTAGAAAACCTCTACAAGTCAAAGATGAGAGTTCTGCAGCAACGAAGAAACTTTCAGCTACTGTCTCGA
AAGCCACAAAGTCTCAGCCTGTACACGCCAGCAGTGTAACAGTGAAAAGTGATAGAGCCTCACATATGACGACTGCCACT
AAATTTGTGAGCACTACATCTCAGAGCAGTCAACTTGTGCGACCTTCTATTAGAAGTCACCACAGTAATAACCAGAACAC
CATGAAACAAGACATCAGTAGGACGTCTGCCAGTGTTACAGTTAGGAAAGGGCCTCGAGAGAAAGAATTATTACAGTTAA
ATACGGTTTCATCTATTATCAAAACCAGTTCTTCTCAGGACATAAAAAGAAATAAGACACTATCAAGAAGCATGACATCT
GAAATGGTAGCCAGGCCTGCTTCGTCTTCTAATACTAAACTGATAGAAAAGTCAAAAAGCATTGACCAGCGCAGACATAC
CATGGTGAAAGCAGCTATTGATAGTAGATGGACTCAGCCCAGAGAAACTGCGGAGGAGAGAAAGGCTCGTCTGAGTGAGT
GGAAAGCTGGCAAAGGAAGAGTAATGAAAAGGCCTCCGAGCTCAGTGGTTACCCAGCCTGAGCCCGAAGCACAAAATGAA
AAGCCAGTTGGATCCTTCTGGACTACCATGGCAGAAGAAGACGAACAGCGAGTGTTTACTGAAAAAGTAAACAAGACATT
TTCTGAATGCCTAAACCTGATTAATGAGGGATGTCCAAAAGAAGAAGTATTGGTTACACTAAATGACCTGATTAAAAATA
TTCCAGATGCCAAAAAACTTGTTAAATATTGGATATGCCTTGCACGTGTTGAACCACTTACGAGTCCTATTGAAAATGTT
ATCGCAATCTATGAGAAGGCCATTCTGGCAGGAGCTCAGCCTATTGAAGAGATGCGACATGCAATTGTTGACATTCTTAC
AATGAAGAGTCAAGAAAAAGTTAAATTTGGAGAAAATATTGAGGAGGCTTGTGCGACCAAGGAACAAATCCAAGAAGCCA
CCACTGACGATACAAGTGTTAATCTGGGGTCAGAAAAACCGGAAATAGAAAATAAGCATCCTAGAAATGTGGTATTTCAA
GGTTGTGAAAAAGAGCAAGATGACAAAACAAAAGACCCAACCAGTGATGTTAAAACCCCCAATACAGAAACTAGGGCGGG
TTGCTTAATTAAATATAATGTGTCTACTACTCCATACTTGCAAAGTGTGAAAAAGAAGATGCAGTTTGACGAAACAAATT
CTGCATTTAAAGAGCTCAAGTTTCTCACACCAGTTAGACGATCTCGACGTCTTCAAGAGAAGACTTCAAAATTGCCAGAT
ATGTTAAAAGACCATTTTCCCTGTGTGTCTTCACTGGAGCAGTTAACAGAGTTGGGAAGTGAAACTGACGCTTTTGTGTG
CCGCCCCAATGCAGCCTTGTGCCGCTTGTACTCGGAGACTGACACGACAGAA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005898 ortholog_one2one 1 retrogene
retro_cfam_968,
Choloepus hoffmanni ENSCHOG00000009905 ortholog_one2one 2 retrogenes
retro_chof_1493, retro_chof_973,
Cavia porcellus ENSCPOG00000012382 ortholog_one2many 1 retrogene
retro_cpor_171,
Felis catus ENSFCAG00000010021 ortholog_one2many 1 retrogene
retro_fcat_1770,
Myotis lucifugus ENSMLUG00000000132 ortholog_one2many 1 retrogene
retro_mluc_1515,
Monodelphis domestica ENSMODG00000010436 ortholog_one2many 1 retrogene
retro_mdom_1364,
Mustela putorius furo ENSMPUG00000017996 ortholog_one2one 1 retrogene
retro_mputfur_1270,
Mus musculus ENSMUSG00000037725 ortholog_one2one 1 retrogene
retro_mmus_2651,
Otolemur garnettii ENSOGAG00000008428 ortholog_one2one 1 retrogene
retro_ogar_1743,
Tupaia belangeri ENSTBEG00000005807 ortholog_one2one 1 retrogene
retro_tbel_176,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_1491 87.24 55.85
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2. retro_ttru_1741 90.89 57.46
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Download FASTA sequences of all ENSTTRG00000009624 retrocopies