Parental gene:

CKAP2, ENSTBEG00000005807

Aliases:None
Description:cytoskeleton associated protein 2 [Source:HGNC Symbol;Acc:1990]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_6123:444..98927(+)


>ENSTBEG00000005807
ATGAGCACCCCAACAGTGCCCCTGCACCTGCAGCTGGCTCCGAGTCAAAGAACCCAGTCCTCGTTCATAGAACAAAGAAG
ACAAAAATTCAAGGAACATCTGTTAAGAAGAAAAACAGTTTTTGCACACAAACAGGAAAATCAGATAGTATCCAGTAGTA
GAGGCCAGAGAGTGATGACTCCTGAGGTCCAGGTTGAAGAAAGGAAAAATGTTCAGAAACTTAAAACAGAAATGGCTGAT
AAAGAAAATGCCAGTAGACCCACAGTGAGCAAAAATGATGCAGTAATGGGGAAAAAATGCATTCCTTTAAAACCTTCAAA
TGAATTAACCAATTCAACTACCCCAGTTGCTACACATAATTTTGATGATGCCAATCAAACTCTGCAGTTGTTATCGATTA
AAGATGATCCCCCAAATCAACATATGACATTAAGCCAGGCATTTCACTTTAAGAATAATAATAAAAAGAAACAAATCACT
ACAGAAAAACCAAAGCAAGATGTTAATGTGCCCAAGAAACCTATCCTTGGATCTTATCGTGGCCAAATTGTGCAGTCTAA
GGTTAATTCATTTAGAAAACCTCTACAAGTCAAAGATGAGAGTTCTACAACAACAAAGAAACTTTCAACTACTGTCTCTA
AAGTCACAAAGCCTCGATCTGTAAATATCAGCACTGTAACAGTAAAAAGTGGTAGATCCTCAAATCTGACTGCTACCACT
AAATCTGTGAGCACTACATCCCAGAGCACACAACTTGTTCGACCTCCTATAAGAAATCACCACACTAATACCTGGGACAC
AGTGAAACAAGGAATCAGTAGGACCTCTGCCGTTACAATCCATAAAGGGCCTTGTGAAAAAGAATTATTACAATCTAAAA
AGCTTTTATCTAGTGTCAAAACCAGTTCTTCTGAGGACATAAAAAGAATTCCCCCTCAACCAAGAAGCATCACATCTGAA
ATTGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCATTGAGCAGCGAAGACACACTAT
AGCAAAAGTAACTACTGATAGTAGATCAGCCCAGCCCAAAGAAACAGCAGAAGAGAGAAAAGCTCGTCTGAGTGAGTGGA
AAGCCAACAAAGGAAGAATGGTGAAAAGGCCACCTAATTCAGTGGTTACCCAGCCTGAGCCTGAAGCACAAAATCAAAAA
CCAGTTGGGTCCTTCTGGACTACCATGGCAGAAGAAGACGAACAAAGATTATTTACTGAAAAAGTGAATAAGACATTTTC
TGAATGCCTGAACCTGATTAATGAGGGATGCCCAAAAGAAGAAGTATTGGTCACACTGAATGACTTGATTAAAAATATTC
CAGATGCTAAAAAACTTGTTAAATATTGGATATGTCTTGCACGTATTGAATCAATTACAAGTTCTATTGAAGATATTATT
GCACTTTATGAGCAGGGCATTCTGGCAGGGGCTCACCCTATTGAAGAGATGCGACATGTGATTGTAGATATTATCACAAT
GAAGAATCAAGAAAAAGAAAAGGTTAATTTGGAGAAAAATACTGAAGATGATTGTGTAACCCAAGAACAAATCCAAGAAG
TTGACACTGAATATGTAGGTGTAAATCTACAGCTAGGAAAACCAGAAACGGAGAATAAACATCATCGAAATGTGGTATTT
CAGGATTGTGAAAAGGAGCAAGATGACAAAACAAAAGAGTCGACCTGTGATGTTAAAACTCCTAATACAGAAACTAGGGC
GGGTTGCTTAATAAAATATAATGTGTCTACTACTCCATACTTGCAAAGTGAAAAGAAGAAGGTGCAGTTTGATGAAATAA
ATTCTACATTTAAAGAGGTGAAATTTTTGACACCAGTGAGATCTCAATGTCTTCAAGAGAAGGCTTCTAAATTGCCAGAT
ATGTTAAAAGACCATTATCTTTATGTGTCTTTATTGAAACAGTTAATGGAGTTAGGAAGTGAAACTGACGCTTTCATATG
CTGCCATAATGCAGCACTGTGCCAAATGTACTTCGAGACTGAAACAGCAGAA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005898 ortholog_one2one 1 retrogene
retro_cfam_968,
Choloepus hoffmanni ENSCHOG00000009905 ortholog_one2one 2 retrogenes
retro_chof_1493, retro_chof_973,
Cavia porcellus ENSCPOG00000012382 ortholog_one2many 1 retrogene
retro_cpor_171,
Felis catus ENSFCAG00000010021 ortholog_one2many 1 retrogene
retro_fcat_1770,
Myotis lucifugus ENSMLUG00000000132 ortholog_one2many 1 retrogene
retro_mluc_1515,
Monodelphis domestica ENSMODG00000010436 ortholog_one2many 1 retrogene
retro_mdom_1364,
Mustela putorius furo ENSMPUG00000017996 ortholog_one2one 1 retrogene
retro_mputfur_1270,
Mus musculus ENSMUSG00000037725 ortholog_one2one 1 retrogene
retro_mmus_2651,
Otolemur garnettii ENSOGAG00000008428 ortholog_one2one 1 retrogene
retro_ogar_1743,
Tupaia belangeri ENSTBEG00000013625 within_species_paralog 2 retrogenes
retro_tbel_1637, retro_tbel_4436,
Tursiops truncatus ENSTTRG00000009624 ortholog_one2one 2 retrogenes
retro_ttru_1491, retro_ttru_1741,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_176 72.49 50.29
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Download FASTA sequences of all ENSTBEG00000005807 retrocopies