Parental gene:

KPNA7, ENSTBEG00000009007

Aliases:None
Description:karyopherin alpha 7 (importin alpha 8) [Source:HGNC Symbol;Acc:21839]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_4076:495316..569453(-)


>ENSTBEG00000009007
ATGCCTACCTTAGATGCTCCTGAAGAGAGGCTGAGAAAATTTAAGTACCGAGGCAAAGATGCATCTGTGAGGCGGCAACA
GCGGATGACGGTAAGCCTCGAGCTTCGGAAGGCCAAGAAAGATGAGCAGGCCTTAAAGAGAAGGAATATTACCAATATCT
TTCCGGACCCAACTTCTGAAAAACCAGACAGAGGGGTAGTCAGCCTTACTCTGGATGAGATAGTAAAAGGTGTGAATGAT
TCCGATCCAGCCCTATGTTTCCAGGCTACCCAGGCAGCCAGGAAAATGCTATCTCGGGAAAGGAATCCCCCTCTAAAATT
GATTATTGAAGCAGGGCTCATCCCCAGACTGGTGGAGTTCCTGAAGTCCTCACTTCACCCTTGTTTGCAGTTCGAGGCAG
CCTGGGCTCTGACCAACATTGCTTCAGGAACTTCAGAGCAGACTCGAGCTGTTGTGGAAGGGGGTGCCATCCAGCCCTTG
ATCAAGCTCCTATCTTCCCCCAATGTGACTGTGTGTGAACAGGCAGTGTGGGCTCTTGGTAATATAGCCGGTGATGGCCC
AGAGTTCAGAGACATCATTATCTCAAGCAATGCCATCCCACATCTGCTGGCCCTGGTTTCATCAACCTTACCAATCACAT
TTCTGCGGAACATCACATGGACCTTGTCTAACCTGTGCCGAAACAAGAACCCGTACCCTTGTGATAAAGCTGTGAAGCAG
ATGCTACCAGTCCTTTCCTACCTTCTGCAGCACCAAGACAGTGAGATTGTCTCAGACACCTGCTGGGCCCTGTCCTACCT
CACCGATGGCAGTAACGAGCGCATTGGTCACGTGGTTGACATGGGGGTCCTGCCCAGACTGGTAGAGCTCCTGGCTAGTT
CAGAACTCAATGTCTTGACCCCTTCTCTCCGCACCGTGGGAAACATTGTCACGGGAACAGATCACCAGACCCAAATGGCT
ATTGATGCTGGCATGCTGAGCCTGTTGCCCCAGCTCTTGGGACACCCCAAGCCCTCAATCCAGAAGGAGGCAGCCTGGGC
CCTAAGCAATGTGGCCGCAGGGCCCTGCCATCATATTCAGCAGCTGATTTCTTATGACATGCTGCCCCCCTTGGTGGCTC
TGCTAAAAAATGGAGATTTTAAAGTCCAAAAAGAGGCTGTTTGGGCAGTGGCTAACTTCACAACTGGGGCCACTGTAGAC
CAGTTGATCCAGCTTGTCCACTCTGGAGTCTTAGAGCCACTGTTGAAACTGCTCACTGTCCCAGATGTTAAAATTGTTCT
CATCATCCTCGATGTCATCTCTTATATCCTCCAGGTGTCAGAGAAACTGTCTGAGAAGGAAAACCTGTGTCTTTTGATAG
AAGAACTTGGTGGAATCGATAAAATTGAAGCTTTACAGCTTCATGAGAACCATCAGATTGGCCAACTTGCTCTGACTATC
ATCGAGAAACACTTTGGTGAG

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000015125 ortholog_one2one 2 retrogenes
retro_cfam_459, retro_cfam_861,
Choloepus hoffmanni ENSCHOG00000004243 ortholog_one2one 1 retrogene
retro_chof_805,
Callithrix jacchus ENSCJAG00000015943 ortholog_one2one 1 retrogene
retro_cjac_2964,
Equus caballus ENSECAG00000000554 ortholog_one2one 1 retrogene
retro_ecab_981,
Echinops telfairi ENSETEG00000000096 ortholog_one2one 1 retrogene
retro_etel_1548,
Homo sapiens ENSG00000185467 ortholog_one2one 1 retrogene
retro_hsap_3337,
Mus musculus ENSMUSG00000038770 ortholog_one2one 2 retrogenes
retro_mmus_2844, retro_mmus_3301,
Nomascus leucogenys ENSNLEG00000010827 ortholog_one2one 1 retrogene
retro_nleu_1680,
Otolemur garnettii ENSOGAG00000031106 ortholog_one2many 3 retrogenes
retro_ogar_1289, retro_ogar_3237, retro_ogar_353,
Ochotona princeps ENSOPRG00000015434 ortholog_one2one 2 retrogenes
retro_opri_1101, retro_opri_118,
Pongo abelii ENSPPYG00000017369 ortholog_one2one 1 retrogene
retro_pabe_2750,
Pan troglodytes ENSPTRG00000019446 ortholog_one2one 2 retrogenes
retro_ptro_102, retro_ptro_2142,
Tupaia belangeri ENSTBEG00000006274 within_species_paralog 14 retrogenes
retro_tbel_1635, retro_tbel_2077, retro_tbel_2672, retro_tbel_2792, retro_tbel_290, retro_tbel_3638, retro_tbel_4120, retro_tbel_4358, retro_tbel_4414, retro_tbel_4435, retro_tbel_4558, retro_tbel_810, retro_tbel_97, retro_tbel_976,
Tursiops truncatus ENSTTRG00000002998 ortholog_one2one 2 retrogenes
retro_ttru_1426, retro_ttru_430,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_1475 53.07 81.52
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2. retro_tbel_3862 56.22 50.10
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3. retro_tbel_3962 55.36 58.52
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Download FASTA sequences of all ENSTBEG00000009007 retrocopies