Parental gene:

KPNA7, ENSPTRG00000019446

Aliases:None
Description:karyopherin alpha 7 (importin alpha 8) [Source:HGNC Symbol;Acc:21839]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:7:99713974..99748812(-)


>ENSPTRG00000019446
ATGCCGACCTTAGATGCTCCAGAAGAGAGGCGGAGAAAATTTAAGTACCGAGGCAAAGATGCATCTCTGAGGCGACAGCA
GAGGATGGCAGTCAGCCTGGAGCTCCGAAAGGCCAAGAAAGATGAACAGACCTTAAAGAGAAGGAATATCATGAGCTTCT
GCCCTGACACACCTTCTGAAAAAACAGCCAAAGGGGTGGCGGTCAGCCTCACTCTGGGTGAAATAATCGAAGGTGTGAAT
AGCTCAGATCCAGTCCTATGTTTCCAGGCCACCCAGACAGCCAGGAAAATGCTATCCCGGGAAAAGAACCCCCCTCTGAA
ACTGGTCATTGAAGCGGGCCTCATTCCCAGGATGGTGGAGTTCCTGAAGTCATCACTTTACCCCTGCTTGCAGTTTGAGG
CTGCCTGGGCCCTGACCAACATCGCTTCAGGGACTTCGGAGCAGACTCGTGCCGTGGTAGAAGGGGGAGCCATCCAGCCC
TTGATTGAGCTCCTGTCTTCCTCCAACGTGGCTGTGTGTGAACAGGCAGTGTGGGCTCTTGGTAATATAGCCGGTGATGG
CCCAGAGTTCAGAGATAACGTCATCACAAGCAATGCCATCCCACATCTGCTAGCCTTGATTTCACCCACCCTGCCGATCA
CATTTCTGCGGAACATCACGTGGACCTTGTCGAATCTGTGCCGAAACAAGAACCCATACCCTTGCGACACTGCGGTGAAG
CAGATACTGCCGGCCCTCCTTCACCTCCTGCAGCACCAGGACAGTGAGGTTCTCTCGGACGCCTGCTGGGCACTGTCCTA
CCTCACCGACGGCTCCAACAAGCGCATCGGCCAAGTGGTTAACACGGGGGTCCTGCCCAGGCTGGTAGTGCTCATGACCA
GCTCAGAACTCAATGTCTTGACTCCTTCTCTCCGCACCGTGGGGAACATTGTCACGGGCACAGATGAGCAGACGCAGATG
GCCATTGATGCGGGTATGCTGAACGTGCTCCCCCAGCTCCTGCAACACAACAAGCCCTCCATCCAAAAGGAGGCAGCCTG
GGCCCTGAGCAACGTAGCAGCGGGGCCTTGTCACCACATCCAGCAGCTGCTTGCCTACGACGTCTTGCCTCCCTTGGTGG
CTCTGCTAAAAAACGGAGAATTTAAAGTCCAGAAAGAGGCTGTTTGGACGGTGGCAAACTTTGCAACAGGGGCCACCATG
GATCAGCTGATCCAGCTCGTCCACTCTGGGGTCCTGGAGCCACTGGTGAATCTGCTCACTGCCCCAGATGTTAAAATTGT
TCTCATCATCCTTGATGTCATCTCTTGCATCCTCCAGGCAGCAGAGAAACGGTCTGAGAAGGAAAACCTGTGTCTTCTGA
TAGAAGAACTTGGTGGGATCGATAGAATTGAGGCTTTACAGCTGCATGAGAACCGTCTAATTGGCCAGTCGGCTTTGAAC
ATCATCGAGAAGCACTTTGGTGAGGAAGAAGATGAGAGCCAAACTTTACTGAGCCAAGTCATAGACCAAGATTATGAATT
TATAGATTATGAATGCTTAGCAAAAAAATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .05 RPM
SRP007412_cerebellum 0 .14 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .05 RPM
SRP007412_liver 0 .07 RPM
SRP007412_testis 4 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000015125 ortholog_one2one 2 retrogenes
retro_cfam_459, retro_cfam_861,
Choloepus hoffmanni ENSCHOG00000004243 ortholog_one2one 1 retrogene
retro_chof_805,
Callithrix jacchus ENSCJAG00000015943 ortholog_one2one 1 retrogene
retro_cjac_2964,
Equus caballus ENSECAG00000000554 ortholog_one2one 1 retrogene
retro_ecab_981,
Echinops telfairi ENSETEG00000000096 ortholog_one2one 1 retrogene
retro_etel_1548,
Homo sapiens ENSG00000185467 ortholog_one2one 1 retrogene
retro_hsap_3337,
Mus musculus ENSMUSG00000038770 ortholog_one2one 2 retrogenes
retro_mmus_2844, retro_mmus_3301,
Nomascus leucogenys ENSNLEG00000010827 ortholog_one2one 1 retrogene
retro_nleu_1680,
Otolemur garnettii ENSOGAG00000031106 ortholog_one2many 3 retrogenes
retro_ogar_1289, retro_ogar_3237, retro_ogar_353,
Ochotona princeps ENSOPRG00000015434 ortholog_one2one 2 retrogenes
retro_opri_1101, retro_opri_118,
Pongo abelii ENSPPYG00000017369 ortholog_one2one 1 retrogene
retro_pabe_2750,
Tupaia belangeri ENSTBEG00000009007 ortholog_one2one 3 retrogenes
retro_tbel_1475, retro_tbel_3862, retro_tbel_3962,
Tursiops truncatus ENSTTRG00000002998 ortholog_one2one 2 retrogenes
retro_ttru_1426, retro_ttru_430,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_102 54.71 97.48
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2. retro_ptro_2142 81.35 96.90
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Download FASTA sequences of all ENSPTRG00000019446 retrocopies