Parental gene:

KPNA2, ENSTBEG00000006274

Aliases:None
Description:karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:HGNC Symbol;Acc:6395]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_4944:4064..16839(+)


>ENSTBEG00000006274
ATGTCCACCAATGAGAATGCAAATTCACCAGCTGCCCGTCTTAACAGATTCCAGAACAAGGGGAAAGACAGTACAGAAAT
GAGGCGGCGAAGAATAGAAGTGAATGTGGAGCTGAGGAAAGCTAAGAAGGATGACCAGATGCTGAAAAGGAGAAATGTAA
GCTCATTTCCCGATGATGCTACTTCTCCACTGCAGGAAAACCGCAACAACCAGGGCACTGTAAATTGGTCTGTTGATGAC
ATTGTCAAAGGCATTAATGGCAACAATTTGGAAAGCCAGCTCCAGGCTACTCAAGCTGCTAGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTGAGATTCTTCCTACTTTAGTTCGTCTTCTGCATCACGATGATCCCGAAGTATT
AGCAGATACCTGCTGGGCCATTTCCTACCTTACTGATGGTCCAAATGAACGGATTGAAATGGTTGTGAAAACAGGAGTTG
TTCCCCAACTTGTGAAGCTTCTAGGAGCTACCGAATTGCCCATTGTGACCCCTGCCCTAAGAGCCATAGGTAATATTGTC
ACTGGGACAGATGAACAGACCCAGGTTGTGATAGATGCTGGAGCACTCGCCGTCTTCCCCAGCCTTCTAACCAACTCCAA
AACAAATATTCAGAAGGAAGCTACGTGGACCATGTCCAACATCACAGCCGGTCGGCAGGACCAGATCCAGCAGGTTGTGA
ATCACGGGCTAGTCCCGTTCCTCGTCGGCGTGCTCTCTAAGGCTGACTTTAAGACGCAGAAGGAGGCTGTGTGGGCTGTG
ACCAACTACACAAGCGGCGGAACAGTGGAGCAGATTGTATACCTCGTCCACTGTGGCATCATAGAACCGCTGATGAACCT
CTTAACTGCAAAAGATACCAAAATTATTCTGGTTATTTTGGATGCCATTTCAAATATTTTTCAGGCTGCTGAGAAGCTAG
GAGAAACTGAGAAACTTAGTATAATGATCGAAGAATGTGGAGGCCTGGATAAAATTGAAGCCCTACAAAACCATGAAAAC
GAGTCTGTGTACAAGTCTTCATTAAACTTGATTGAGAAGTATTTCTCTGTAGAGGAAGAGGAAGATCAGAATGTTGTGCC
CGAAACTACCTCTGACAGCTACACCTTCCAAGTGCAGGATGGGACTCCTGGGGCCTTTAACTTCTAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018411 possible_ortholog 3 retrogenes
retro_amel_1161, retro_amel_1318, retro_amel_440,
Canis familiaris ENSCAFG00000011598 possible_ortholog 2 retrogenes
retro_cfam_648, retro_cfam_90,
Cavia porcellus ENSCPOG00000026318 possible_ortholog 1 retrogene
retro_cpor_46,
Dasypus novemcinctus ENSDNOG00000019151 ortholog_one2one 6 retrogenes
retro_dnov_1184, retro_dnov_1811, retro_dnov_2161, retro_dnov_2279, retro_dnov_379, retro_dnov_693,
Echinops telfairi ENSETEG00000004445 ortholog_one2one 2 retrogenes
retro_etel_346, retro_etel_347,
Felis catus ENSFCAG00000001936 ortholog_one2one 2 retrogenes
retro_fcat_1176, retro_fcat_921,
Myotis lucifugus ENSMLUG00000027946 possible_ortholog 7 retrogenes
retro_mluc_1034, retro_mluc_1258, retro_mluc_1414, retro_mluc_288, retro_mluc_50, retro_mluc_52, retro_mluc_993,
Macaca mulatta ENSMMUG00000018256 possible_ortholog 3 retrogenes
retro_mmul_1140, retro_mmul_1635, retro_mmul_1947,
Monodelphis domestica ENSMODG00000003897 ortholog_one2many 1 retrogene
retro_mdom_271,
Mus musculus ENSMUSG00000018362 possible_ortholog 1 retrogene
retro_mmus_229,
Pongo abelii ENSPPYG00000008569 possible_ortholog 1 retrogene
retro_pabe_3501,
Rattus norvegicus ENSRNOG00000015329 possible_ortholog 1 retrogene
retro_rnor_42,
Sarcophilus harrisii ENSSHAG00000011391 ortholog_one2one 1 retrogene
retro_shar_165,
Tupaia belangeri ENSTBEG00000009007 within_species_paralog 3 retrogenes
retro_tbel_1475, retro_tbel_3862, retro_tbel_3962,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_97 95.71 52.84
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2. retro_tbel_290 81.63 52.84
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3. retro_tbel_810 93.57 52.84
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4. retro_tbel_976 84.48 51.70
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5. retro_tbel_1635 89.72 52.84
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6. retro_tbel_2077 89.29 52.84
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7. retro_tbel_2672 93.21 52.84
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8. retro_tbel_2792 91.32 50.19
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9. retro_tbel_3638 96.42 52.65
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10. retro_tbel_4120 93.17 52.46
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11. retro_tbel_4358 82.44 52.84
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12. retro_tbel_4414 93.19 52.84
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13. retro_tbel_4435 93.21 52.84
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14. retro_tbel_4558 82.44 52.84
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Download FASTA sequences of all ENSTBEG00000006274 retrocopies