Parental gene:

ENSSSCG00000012637

Aliases:None
Description:None
Organism:Pig (Sus scrofa)
Coordinates:X:115091103..115105099(-)


>ENSSSCG00000012637
CTGAAGACAGGCCTCTCCATAGCTTCTCTCCTTTTCATGGCTTCTGTTTTTGTTTTTTGTTTTTTGTTTTTGTTTTTGTT
TTTAGTCACTTTGGACAATTGTGTCGAAGTTGGGCGGATTGCCAACACCTACAATCTGACAGAAGTGGATAAATACGTGA
ACAGTTTCGTCTTGAAGAATTTTCCTGCATTACTGAGCACCGGAGAGTTCTTGAAACTCCCTTTCGAACGGCTTGCCTTC
GTGCTTTCCAGTAATAGCCTTAAGCACTGCACAGAACTTGAGCTCTTTAAGGCTACCTGTCGCTGGCTCCGCCTGGAAGA
GCCTCGGATGGACTTTGCTGCAAAATTAATGAAGAACATACGATTTCCACTGATGACACCGCAGGAGCTCATTAATTACG
TGCAAACCGTGGATTTCATGAGAACTGACAATACTTGTGTGAATCTCCTTTTGGAAGCCAGCAATTACCAAATGATGCCA
TACATGCAGCCAGTTATGCAGTCAGACAGGACTGCCATTCGGTCTGACACCACTCACTTGGTTACACTAGGAGGGGTGCT
GAGGCAGCAGCTGGTTGTCAGCAAGGAGTTGCGCATGTATGATGAAAAGGCCCATGAGTGGAAGTCCTTAGCCCCCATGG
ATGCCCCAAGGTACCAGCATGGCATCGCCGTTATTGGAAATTTCCTCTATGTCGTTGGTGGACAGAGTAATTACGACACA
AAAGGAAAAACGGCCGTTGATACAGTCTTCAGATTTGATCCTCGATACAATAAGTGGATGCAAGTTGCATCTTTAAATGA
AAAGCGCACCTTCTTCCACCTAAGTGCCCTCAAAGGATATCTGTATGCAGTCGGTGGGCGAAATGCAGCTGGTGAACTGC
CTACTGTAGAATGTTACAATCCAAGAACAAATGAATGGACCTATGTTGCCAAAATGAGTGAGCCCCACTATGGCCATGCT
GGAACTGTGTATGGAGGCGTAATGTATATTTCAGGAGGAATTACTCACGACTTCCAAAAAGAGCTCATGTGCTTTGATCC
TGATACTGACAAATGGATCCAGAAGGCGCCGATGACCACCGTCAGAGGTCTGCATTGCATGTGTACAGTGGGAGAAAGGC
TCTATGTCATCGGCGGCAATCACTTCAGAGGAACAAGTGATTATGACGACGTCCTAAGCTGTGAATACTACTCACCTATC
CTTGACCAGTGGACCCCGATTGCTGCCATGTTAAGAGGGCAGAGTGATGTTGGGGTTGCTGTCTTTGAAAATAAAATCTA
CGTGGTCGGTGGGTATTCGTGGAATAATCGCTGTATGGTAGAGATAGTGCAGAAATATGATCCAGATAAAGATGAATGGC
ATAAGGTTTTTGATCTCCCAGAGTCCCTGGGTGGCATCCGAGCTTGCACACTCACCGTGTTCCCACCTGAAGAAACCACG
CCATCACCTTCTAGAGAGTCCCCTCTTTCTGCACCTTAA

Library Parental gene expression (RPM)
SRP014902_placenta 0 .00 RPM
SRP014902_testis 7 .64 RPM
SRP018288_heart 1 .13 RPM
SRP018288_kidney 24 .63 RPM
SRP018288_liver 0 .96 RPM
SRP018288_lung 9 .98 RPM
SRP018856_adipose 22 .26 RPM
SRP035408_brain 36 .33 RPM
SRP035408_liver 1 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001782 ortholog_one2one 1 retrogene
retro_amel_749,
Bos taurus ENSBTAG00000000501 ortholog_one2one 1 retrogene
retro_btau_44,
Canis familiaris ENSCAFG00000018272 ortholog_one2one 1 retrogene
retro_cfam_422,
Callithrix jacchus ENSCJAG00000002447 ortholog_one2many 1 retrogene
retro_cjac_3406,
Cavia porcellus ENSCPOG00000011268 ortholog_one2many 1 retrogene
retro_cpor_590,
Equus caballus ENSECAG00000008237 ortholog_one2one 1 retrogene
retro_ecab_622,
Loxodonta africana ENSLAFG00000008122 ortholog_one2many 1 retrogene
retro_lafr_1018,
Myotis lucifugus ENSMLUG00000027393 ortholog_one2one 1 retrogene
retro_mluc_204,
Macaca mulatta ENSMMUG00000002293 ortholog_one2many 1 retrogene
retro_mmul_42,
Mustela putorius furo ENSMPUG00000001730 ortholog_one2one 1 retrogene
retro_mputfur_169,
Mus musculus ENSMUSG00000036782 ortholog_one2many 1 retrogene
retro_mmus_121,
Nomascus leucogenys ENSNLEG00000014736 ortholog_one2many 1 retrogene
retro_nleu_1031,
Oryctolagus cuniculus ENSOCUG00000001993 ortholog_one2many 1 retrogene
retro_ocun_254,
Pongo abelii ENSPPYG00000020658 ortholog_one2many 1 retrogene
retro_pabe_60,
Pteropus vampyrus ENSPVAG00000015989 possible_ortholog 1 retrogene
retro_pvam_1485,
Rattus norvegicus ENSRNOG00000014029 ortholog_one2many 1 retrogene
retro_rnor_154,
Ictidomys tridecemlineatus ENSSTOG00000012035 ortholog_one2many 1 retrogene
retro_itri_124,
Tarsius syrichta ENSTSYG00000002521 ortholog_one2many 1 retrogene
retro_tsyr_19,
Tursiops truncatus ENSTTRG00000014098 ortholog_one2one 1 retrogene
retro_ttru_26,
Vicugna pacos ENSVPAG00000003091 ortholog_one2one 1 retrogene
retro_vpac_8,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_51 90.47 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSSCG00000012637 retrocopies