Parental gene:

Arf3, ENSRNOG00000033155

Aliases:None
Description:ADP-ribosylation factor 3 [Source:UniProtKB/Swiss-Prot;Acc:P61206]
Organism:Rat (Rattus norvegicus)
Coordinates:X:114922630..114927693(-)


>ENSRNOG00000033155
ATGGGCAATATCTTTGGGAACCTTCTGAAGAGCCTGATCGGGAAGAAGGAGATGCGCATCCTGATGGTGGGCCTGGATGC
TGCAGGAAAGACCACCATCCTCTATAAGCTGAAGCTTGGCGAGATTGTTACCACCATTCCCACCATCGGGTTTAATGTGG
AGACAGTGGAATATAAGAATATCAGCTTCACAGTATGGGACGTAGGTGGCCAGGACAAGATTCGGCCCCTCTGGAGACAC
TACTTCCAGAATACCCAAGGCTTGATATTTGTGGTTGACAGCAATGACCGGGAGCGAGTGAACGAGGCCCGGGAAGAGCT
GATGAGGATGCTGGCGGAGGATGAGCTCCGGGATGCTGTGCTGCTTGTGTTTGCAAACAAACAGGATTTGCCGAATGCTA
TGAATGCTGCTGAGATCACAGACAAGCTGGGCCTGCACTCTCTGCGCCACCGCAATTGGTACATTCAGGCCACCTGTGCC
ACCAGCGGGGACGGGCTCTATGAAGGCTTGGACTGGCTGGCCAATCAGCTCAAAAACAAGAAGTGA

Library Parental gene expression (RPM)
SRP017611_brain 89 .22 RPM
SRP017611_kidney 10 .33 RPM
SRP017611_liver 3 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000008240 ortholog_one2one 1 retrogene
retro_acar_12,
Ailuropoda melanoleuca ENSAMEG00000007042 possible_ortholog 2 retrogenes
retro_amel_28, retro_amel_70,
Canis familiaris ENSCAFG00000008767 possible_ortholog 1 retrogene
retro_cfam_119,
Cavia porcellus ENSCPOG00000025074 ortholog_one2one 1 retrogene
retro_cpor_92,
Ciona savignyi ENSCSAVG00000007011 possible_ortholog 1 retrogene
retro_csav_2,
Felis catus ENSFCAG00000000088 possible_ortholog 2 retrogenes
retro_fcat_2, retro_fcat_59,
Homo sapiens ENSG00000134287 ortholog_one2one 1 retrogene
retro_hsap_36,
Latimeria chalumnae ENSLACG00000019009 possible_ortholog 1 retrogene
retro_lcha_10,
Loxodonta africana ENSLAFG00000004207 ortholog_one2one 1 retrogene
retro_lafr_115,
Macropus eugenii ENSMEUG00000005072 possible_ortholog 7 retrogenes
retro_meug_1036, retro_meug_1117, retro_meug_1857, retro_meug_29, retro_meug_395, retro_meug_616, retro_meug_946,
Microcebus murinus ENSMICG00000017545 ortholog_one2one 1 retrogene
retro_mmur_37,
Myotis lucifugus ENSMLUG00000029846 possible_ortholog 1 retrogene
retro_mluc_119,
Macaca mulatta ENSMMUG00000006968 possible_ortholog 1 retrogene
retro_mmul_174,
Monodelphis domestica ENSMODG00000013804 ortholog_one2one 1 retrogene
retro_mdom_241,
Mustela putorius furo ENSMPUG00000014730 possible_ortholog 1 retrogene
retro_mputfur_86,
Mus musculus ENSMUSG00000051853 ortholog_one2one 1 retrogene
retro_mmus_147,
Nomascus leucogenys ENSNLEG00000017859 ortholog_one2one 2 retrogenes
retro_nleu_1348, retro_nleu_94,
Ochotona princeps ENSOPRG00000007411 possible_ortholog 2 retrogenes
retro_opri_13, retro_opri_3,
Petromyzon marinus ENSPMAG00000000531 possible_ortholog 1 retrogene
retro_pmar_5,
Pongo abelii ENSPPYG00000004473 possible_ortholog 1 retrogene
retro_pabe_126,
Pteropus vampyrus ENSPVAG00000004626 possible_ortholog 1 retrogene
retro_pvam_7,
Rattus norvegicus ENSRNOG00000012623 within_species_paralog 2 retrogenes
retro_rnor_1036, retro_rnor_1884,
Rattus norvegicus ENSRNOG00000030591 within_species_paralog 3 retrogenes
retro_rnor_1268, retro_rnor_1348, retro_rnor_1950,
Rattus norvegicus ENSRNOG00000048089 within_species_paralog 1 retrogene
retro_rnor_2521,
Sarcophilus harrisii ENSSHAG00000003635 ortholog_one2one 2 retrogenes
retro_shar_25, retro_shar_364,
Ictidomys tridecemlineatus ENSSTOG00000004295 possible_ortholog 1 retrogene
retro_itri_175,
Tetraodon nigroviridis ENSTNIG00000011685 possible_ortholog 1 retrogene
retro_tnig_19,
Tursiops truncatus ENSTTRG00000004698 ortholog_one2one 1 retrogene
retro_ttru_1081,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_272 69.54 96.13
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Download FASTA sequences of all ENSRNOG00000033155 retrocopies