Parental gene:

ARF3, ENSACAG00000008240

Aliases:None
Description:None
Organism:Anole lizard (Anolis carolinensis)
Coordinates:2:94127672..94145297(+)


>ENSACAG00000008240
ATGGGGAACATTTTTGGCAACCTGCTGAAGAGCCTGATTGGCAAGAAGGAGATGCGTATCCTTATGGTTGGACTTGATGC
TGCTGGGAAAACCACTATCCTCTACAAACTGAAGCTGGGAGAGATTGTCACTACCATCCCCACTATTGGATTTAATGTGG
AAACGGTTGAATATAAGAACATTAGCTTCACTGTATGGGATGTTGGTGGCCAGGACAAGATACGGCCCCTGTGGCGGCAT
TACTTCCAGAACACCCAGGGTTTGATCTTTGTGGTGGATAGCAATGATCGGGAGCGAGTGAATGAAGCCCGTGAGGAGCT
GATGAGGATGCTGGCAGAGGATGAATTGCGAGACGCTGTTCTTCTTGTCTTTGCTAATAAGCAGGACCTCCCTAATGCCA
TGAATGCTGCAGAAATCACAGACAAGCTGGGTCTACACTCACTGCGCCACCGCAACTGGTACATCCAGGCCACCTGCGCC
ACGAGTGGGGACGGCCTCTACGAGGGCTTGGATTGGCTGGCCAACCAGCTGAAGAACAAGAAATGA

Library Parental gene expression (RPM)
SRP009831_adrenal 20 .32 RPM
SRP009831_brain 157 .41 RPM
SRP009831_dewlap 30 .08 RPM
SRP009831_embryo 37 .05 RPM
SRP009831_heart 15 .82 RPM
SRP009831_liver 6 .83 RPM
SRP009831_lung 16 .77 RPM
SRP009831_ovary 39 .19 RPM
SRP009831_skeletal_muscle 1 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000025074 ortholog_one2one 1 retrogene
retro_cpor_92,
Ciona savignyi ENSCSAVG00000007011 possible_ortholog 1 retrogene
retro_csav_2,
Homo sapiens ENSG00000134287 ortholog_one2one 1 retrogene
retro_hsap_36,
Latimeria chalumnae ENSLACG00000019009 possible_ortholog 1 retrogene
retro_lcha_10,
Loxodonta africana ENSLAFG00000004207 ortholog_one2one 1 retrogene
retro_lafr_115,
Macropus eugenii ENSMEUG00000005072 possible_ortholog 7 retrogenes
retro_meug_1036, retro_meug_1117, retro_meug_1857, retro_meug_29, retro_meug_395, retro_meug_616, retro_meug_946,
Microcebus murinus ENSMICG00000017545 ortholog_one2one 1 retrogene
retro_mmur_37,
Monodelphis domestica ENSMODG00000013804 ortholog_one2one 1 retrogene
retro_mdom_241,
Mus musculus ENSMUSG00000051853 ortholog_one2one 1 retrogene
retro_mmus_147,
Nomascus leucogenys ENSNLEG00000017859 ortholog_one2one 2 retrogenes
retro_nleu_1348, retro_nleu_94,
Petromyzon marinus ENSPMAG00000000531 possible_ortholog 1 retrogene
retro_pmar_5,
Rattus norvegicus ENSRNOG00000033155 ortholog_one2one 1 retrogene
retro_rnor_272,
Rattus norvegicus ENSRNOG00000048089 possible_ortholog 1 retrogene
retro_rnor_2521,
Sarcophilus harrisii ENSSHAG00000003635 ortholog_one2one 2 retrogenes
retro_shar_25, retro_shar_364,
Tetraodon nigroviridis ENSTNIG00000011685 possible_ortholog 1 retrogene
retro_tnig_19,
Tursiops truncatus ENSTTRG00000004698 ortholog_one2one 1 retrogene
retro_ttru_1081,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_12 69.54 96.13
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Download FASTA sequences of all ENSACAG00000008240 retrocopies