Parental gene:

Btbd10, ENSRNOG00000014341

Aliases:Btbd10, RGD1306301
Description:BTB/POZ domain-containing protein 10 [Source:RefSeq peptide;Acc:NP_001014044]
Organism:Rat (Rattus norvegicus)
Coordinates:1:185106508..185164263(-)


>ENSRNOG00000014341
ATGAGTCTGCATGGTGCTAGTGGGGGACATGAGAGATCAAGAGATAGACGAAGGTCAAGTGACAGATCACGAGATTCATC
TCACGAGAGAGCAGAGTCTCAGCTCACTCCTTGTATTCGAAATGTGACTTCACCAACAAGGCAGCATCATATTGAACGAG
AAAAAGACCATAGTTCATCTCGTCCAAGCAGTCCTCGTCCTCAAAGAGCATCCCCAAATGGCTCCATTAGTAGTGCTGGG
AACAGCAGCAGGAACAGCAGCCAGTCAAGCTCAGATGGAAGCTGTAAGGCGTCCGGGGAGATGGTGTTTGTGTATGAGAA
TGCAAAAGAAGGGGCTCGCAGTGTGAGGACATCTGAGCGAGTGACCCTGATAGTGGATAACACCAGATTTGTTGTGGACC
CGTCCATTTTTACTGCACAGCCAAATACAATGTTGGGCAGGATGTTTGGATCTGGCCGGGAACATAATTTCACACGTCCC
AATGAGAAGGGAGAATATGAGGTGGCAGAGGGAATTGGTTCTACTGTGTTTCGAGCTATTTTGGATTACTATAAGACAGG
AATCATCCGCTGTCCTGATGGCATCTCTATTCCTGAACTGAGAGAAGCGTGCGATTACCTTTGTATCTCTTTTGAATACA
GCACAATTAAATGTAGAGATCTCAGTGCCCTTATGCATGAGTTATCAAATGATGGTGCTCGTAGACAATTTGAATTTTAT
CTGGAAGAAATGATCCTCCCTCTTATGGTAGCAAGTGCCCAGAGTGGAGAGCGAGAGTGCCATATTGTAGTGCTTACAGA
TGATGATGTAGTTGATTGGGATGAGGAGTATCCACCTCAGATGGGAGAGGAATATTCACAGATTATTTATAGCACAAAAT
TATATAGATTTTTCAAGTACATTGAAAACAGAGATGTGGCCAAATCAGTTTTGAAGGAGAGGGGTCTTAAGAAGATTAGA
TTGGGAATAGAAGGCTACCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCAGGGGGCCGTCCAGAAGTCATTTACAACTA
TGTCCAAAGACCCTTCATTCGAATGTCCTGGGAGAAGGAGGAAGGAAAGAGCCGGCACGTAGACTTCCAGTGTGTAAAGA
GCAAATCTATCACCAACCTGGCAGCAGCTGCTGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCACCCCACTCCCCAG
GTGGATGAGCTGGATAGCCTTCCCAGCCACCCTGCCTCAGGCAACAATGACCTCGATCCTGACGCACAGAATCCAATGCT
GTGA

Library Parental gene expression (RPM)
SRP017611_brain 47 .52 RPM
SRP017611_kidney 10 .12 RPM
SRP017611_liver 3 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000024984 ortholog_one2many 1 retrogene
retro_cpor_137,
Monodelphis domestica ENSMODG00000008728 ortholog_one2one 1 retrogene
retro_mdom_1020,
Mus musculus ENSMUSG00000038187 ortholog_one2one 1 retrogene
retro_mmus_3560,
Nomascus leucogenys ENSNLEG00000017691 ortholog_one2one 1 retrogene
retro_nleu_232,
Otolemur garnettii ENSOGAG00000000739 ortholog_one2one 1 retrogene
retro_ogar_3201,
Pan troglodytes ENSPTRG00000003377 ortholog_one2one 1 retrogene
retro_ptro_753,
Sorex araneus ENSSARG00000000266 ortholog_one2one 1 retrogene
retro_sara_405,
Sus scrofa ENSSSCG00000013395 ortholog_one2one 2 retrogenes
retro_sscr_639, retro_sscr_640,
Tarsius syrichta ENSTSYG00000000445 ortholog_one2one 2 retrogenes
retro_tsyr_196, retro_tsyr_367,
Tursiops truncatus ENSTTRG00000013943 ortholog_one2one 1 retrogene
retro_ttru_897,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2220 89.14 51.76
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_rnor_2872 87.01 77.28
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSRNOG00000014341 retrocopies