Parental gene:

BTBD10, ENSPTRG00000003377

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:11:13246483..13323778(-)


>ENSPTRG00000003377
ATGGCAGGACGGCCTCATCCCTATGATGGTAACTCCAGTGATCCAGAGAATTGGGATCGGAAATTGCATAGTAGACCTCG
TAAACTTTATAAACATTCAAGTACTTCCTCGCGTATTGCTAAAGGAGGAGTTGACCACACCAAAATGAGTCTACATGGTG
CTAGTGGGGGACATGAGAGATCAAGAGATAGACGAAGGTCAAGTGACAGATCACGAGATTCATCTCATGAAAGAACAGAG
TCTCAGCTCACTCCTTGTATTAGAAATGTGACTTCTCCAACACGACAGCACCATGTTGAACGAGAAAAAGATCACAGTTC
CTCTCGTCCAAGCAGTCCGCGTCCTCAAAAAGCATCCCCAAATGGTTCCATTAGCAGTGCTGGGAACAGCAGCAGAAACA
GTAGTCAGTCAAGTTCAGATGGTAGCTGTAAGACAGCTGGGGAGATGGTGTTTGTATATGAAAATGCAAAAGAAGGAGCT
CGGAATATAAGAACGTCAGAACGAGTGACACTAATAGTGGATAACACTAGATTTGTTGTAGACCCATCCATTTTTACTGC
ACAGCCAAATACAATGTTGGGCAGGATGTTTGGATCTGGCCGAGAACATAACTTTACACGACCCAATGAGAAAGGAGAGT
ATGAGGTGGCAGAGGGAATTGGTTCCACTGTGTTTCGAGCTATTCTGGATTACTATAAAACAGGAATAATCCGTTGTCCT
GATGGCATATCTATTCCTGAACTGAGAGAAGCATGTGACTATCTTTGTATCTCTTTTGAATATAGCACTATTAAATGTAG
AGATCTCAGTGCCCTAATGCATGAGTTATCAAATGATGGTGCTCGTAGACAATTTGAATTTTATCTGGAAGAAATGATCC
TCCCTCTCATGGTAGCTAGTGCCCAGAGTGGGGAACGGGAATGTCATATAGTGGTGCTTACAGATGATGATGTGGTTGAT
TGGGATGAAGAATATCCACCACAGATGGGAGAAGAATATTCACAAATTATTTATAGCACAAAATTATATAGATTTTTCAA
GTATATTGAAAACAGAGATGTGGCCAAGTCAGTTTTGAAGGAGAGGGGTCTTAAGAAGATTAGATTGGGAATAGAAGGTT
ATCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCTGGAGGCCGCCCAGAAGTGATCTACAACTATGTCCAAAGACCCTTT
ATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCATGTAGACTTTCAGTGTGTAAAGAGTAAATCTATCACCAA
TCTTGCAGCAGCTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCATCCAACTCCACAAGTGGATGAGCTGGATA
TTCTCCCTATCCATCCCCCTTCTGGCAACAGTGACCTCGATCCTGATGCACAGAATCCAATGCTGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 57 .27 RPM
SRP007412_cerebellum 30 .94 RPM
SRP007412_heart 12 .07 RPM
SRP007412_kidney 9 .65 RPM
SRP007412_liver 6 .22 RPM
SRP007412_testis 107 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000024984 ortholog_one2many 1 retrogene
retro_cpor_137,
Monodelphis domestica ENSMODG00000008728 ortholog_one2one 1 retrogene
retro_mdom_1020,
Mus musculus ENSMUSG00000038187 ortholog_one2one 1 retrogene
retro_mmus_3560,
Nomascus leucogenys ENSNLEG00000017691 ortholog_one2one 1 retrogene
retro_nleu_232,
Otolemur garnettii ENSOGAG00000000739 ortholog_one2one 1 retrogene
retro_ogar_3201,
Rattus norvegicus ENSRNOG00000014341 ortholog_one2one 2 retrogenes
retro_rnor_2220, retro_rnor_2872,
Sorex araneus ENSSARG00000000266 ortholog_one2one 1 retrogene
retro_sara_405,
Sus scrofa ENSSSCG00000013395 ortholog_one2one 2 retrogenes
retro_sscr_639, retro_sscr_640,
Tarsius syrichta ENSTSYG00000000445 ortholog_one2one 2 retrogenes
retro_tsyr_196, retro_tsyr_367,
Tursiops truncatus ENSTTRG00000013943 ortholog_one2one 1 retrogene
retro_ttru_897,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_753 90.88 62.32
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Download FASTA sequences of all ENSPTRG00000003377 retrocopies