Parental gene:

Btbd10, ENSMUSG00000038187

Aliases:Btbd10, 1110056N09Rik, Gmrp1
Description:BTB (POZ) domain containing 10 [Source:MGI Symbol;Acc:MGI:1916065]
Organism:Mouse (Mus musculus)
Coordinates:7:113315625..113369392(-)


>ENSMUSG00000038187
ATGGCAGGACGGCCTCATCCCTATGACAGTAACTCCAGTGATCCAGAGAATTGGGATCGGAAATTGCATAGTAGACCTCG
TAAACTTTATAAACATTCAAGCTCTGCCTCACGTGTTGCTAAGGGAGGAGTCGACCACACCAAAATGAGTCTGCATGGTG
CTAGTGGGGGCCATGAGAGATCAAGAGATAGACGCCGGTCAAGTGACAGATCACGAGATTCATCTCATGAGAGAGCAGAG
TCTCAGCTTACTCCTTGTATTCGAAATGTGACTTCACCAACAAGGCAGCATCATATTGAACGAGAAAAAGACCATAGTTC
TTCTCGTCCAAGCAGTCCTCGTCCTCAAAGAGCATCCCCAAATGGCTCCATGAGCAGTGCTGGGAACAGTAGCAGGAACA
GCAGCCAGTCAAGCTCAGATGGTAGCTGTAAAACATCTGGGGAGATGGTGTTTGTGTATGAGAATGCGAAAGAAGGGGCT
CGGAATGTGAGGACATCTGAGCGAGTGACTCTGATAGTGGATAACACCAGATTTGTTGTGGACCCGTCCATTTTTACTGC
ACAGCCAAATACAATGTTGGGCAGGATGTTTGGATCTGGCCGGGAACATAATTTCACACGTCCCAATGAGAAGGGAGAAT
ATGAGGTGGCAGAGGGAATTGGTTCTACTGTGTTTCGAGCTATTTTGGATTACTATAAGACAGGAATCATCCGCTGTCCT
GATGGCATATCGATTCCTGAACTGCGAGAAGCATGTGATTACCTTTGTATCTCTTTTGAATACAGTACAATTAAATGTAG
AGATCTCAGTGCCCTTATGCATGAGTTATCAAATGATGGTGCTCGTAGACAATTTGAATTTTATCTGGAAGAAATGATCC
TCCCTCTCATGGTAGCAAGCGCCCAGAGTGGGGAACGAGAGTGCCATATCGTAGTGCTTACAGATGATGATGTAGTTGAT
TGGGATGAGGAGTATCCACCACAGATGGGAGAAGAATATTCACAGATTATTTATAGCACAAAATTATATAGATTTTTCAA
GTACATTGAAAACAGAGATGTGGCCAAATCAGTTTTGAAGGAGAGGGGTCTTAAGAAGATTAGATTGGGAATAGAAGGCT
ATCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCAGGGGGCCGTCCAGAAGTCATTTACAATTATGTCCAAAGACCCTTC
ATTCGAATGTCCTGGGAGAAGGAGGAAGGAAAGAGTCGGCATGTAGACTTTCAGTGTGTAAAGAGTAAATCCATTACCAA
TCTGGCAGCAGCTGCTGCAGACATTCCCCAGGACCAGCTAGTAGTCATGCACCCTACTCCACAGGTGGACGAGCTGGATA
TCCTTCCCAGCCACCCTGCCTCGGGCAACAATGACCTCGATCCTGATGCACAGAATCCAATGCTGTGA

Library Parental gene expression (RPM)
SRP007412_brain 72 .21 RPM
SRP007412_cerebellum 46 .29 RPM
SRP007412_heart 11 .08 RPM
SRP007412_kidney 11 .01 RPM
SRP007412_liver 3 .85 RPM
SRP007412_testis 155 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000024984 ortholog_one2many 1 retrogene
retro_cpor_137,
Monodelphis domestica ENSMODG00000008728 ortholog_one2one 1 retrogene
retro_mdom_1020,
Nomascus leucogenys ENSNLEG00000017691 ortholog_one2one 1 retrogene
retro_nleu_232,
Otolemur garnettii ENSOGAG00000000739 ortholog_one2one 1 retrogene
retro_ogar_3201,
Pan troglodytes ENSPTRG00000003377 ortholog_one2one 1 retrogene
retro_ptro_753,
Rattus norvegicus ENSRNOG00000014341 ortholog_one2one 2 retrogenes
retro_rnor_2220, retro_rnor_2872,
Sorex araneus ENSSARG00000000266 ortholog_one2one 1 retrogene
retro_sara_405,
Sus scrofa ENSSSCG00000013395 ortholog_one2one 2 retrogenes
retro_sscr_639, retro_sscr_640,
Tarsius syrichta ENSTSYG00000000445 ortholog_one2one 2 retrogenes
retro_tsyr_196, retro_tsyr_367,
Tursiops truncatus ENSTTRG00000013943 ortholog_one2one 1 retrogene
retro_ttru_897,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_3560 88.07 72.88
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Download FASTA sequences of all ENSMUSG00000038187 retrocopies