Parental gene:

Fam133b, ENSRNOG00000009163

Aliases:Fam133b, RGD1306302
Description:Protein FAM133B [Source:UniProtKB/Swiss-Prot;Acc:Q505I5]
Organism:Rat (Rattus norvegicus)
Coordinates:4:27632196..27658496(-)


>ENSRNOG00000009163
ATGGGGAAGCGAGACAATCGCGTGGCCTACATGAATCCAATAGCAATGGCTCGGTCAAGGGGTCCAATCCAGTCTTCAGG
ACCAACAATCCAGGATTATCTGAATCGACCAAGGCCTACCTGGGAGGAAGTGAAGGAGCAGCTGGAAAAGAAAAAGAAGG
GCTCCAAGGCTTTGGCTGAGTTTGAAGAGAAAATGAATGAGAATTGGAAGAAAGAACTAGAAAAACATAGAGAAAAACTA
TTAAGTGGAAATGAGAGCTCATCCAAAAAGCGACAGAAAAAGAAAAAAGAAAAGAAGAAATCTGGTAGGTATTCATCTTC
TTCTTCATCGAGCTCTGATTCTTCCAGCAGTTCTTCAGATTCTGAGGAGGAGGATAAAAAGCAAACAAAAAGAAGGAAGA
AAAAGAAGAGCCATTGCCATAAGTCTCCGGAGACCTCCGTGTCGGATTCAGACTCAGACAGCAAGGATGGTTCAAAAAAG
AAAAAGAAGTCAAAGGATATAACTGAAAGAGAAAAGGACACTAAAGGACTCAGCAAAAAGAGAAAGATGTATGAGGATAA
ACCTTTGTCATCTGAGTCATTGTCAGAGTCAGACTGTGGAGAGGTGCAAGCGAAAAAGAAGAAAAGCGGTGAAGAGCGAG
AGAGAACAACAGACAAAGCTAAAAAGAGAAGGAAGCATAAGAAACACAGCAAGAAGAAGAAAAAGAAGGCTGCCAGTTCA
AGCTCAGACTCGCCGTAG

Library Parental gene expression (RPM)
SRP017611_brain 27 .90 RPM
SRP017611_kidney 21 .56 RPM
SRP017611_liver 10 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007438 ortholog_one2one 1 retrogene
retro_amel_102,
Callithrix jacchus ENSCJAG00000013910 ortholog_one2one 3 retrogenes
retro_cjac_1084, retro_cjac_1163, retro_cjac_4095,
Equus caballus ENSECAG00000026810 ortholog_one2one 1 retrogene
retro_ecab_95,
Homo sapiens ENSG00000234545 ortholog_one2one 4 retrogenes
retro_hsap_2336, retro_hsap_3179, retro_hsap_55, retro_hsap_577,
Loxodonta africana ENSLAFG00000029755 ortholog_one2one 1 retrogene
retro_lafr_594,
Myotis lucifugus ENSMLUG00000005933 ortholog_one2one 1 retrogene
retro_mluc_2301,
Macaca mulatta ENSMMUG00000019802 ortholog_one2one 4 retrogenes
retro_mmul_1415, retro_mmul_226, retro_mmul_420, retro_mmul_765,
Mus musculus ENSMUSG00000058503 ortholog_one2one 2 retrogenes
retro_mmus_3481, retro_mmus_3519,
Nomascus leucogenys ENSNLEG00000015333 ortholog_one2many 1 retrogene
retro_nleu_14,
Pongo abelii ENSPPYG00000025825 ortholog_one2many 1 retrogene
retro_pabe_225,
Sus scrofa ENSSSCG00000015317 ortholog_one2one 1 retrogene
retro_sscr_49,
Ictidomys tridecemlineatus ENSSTOG00000028195 ortholog_one2one 1 retrogene
retro_itri_12,
Tupaia belangeri ENSTBEG00000011674 ortholog_one2one 1 retrogene
retro_tbel_1,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2891 68.16 73.06
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Download FASTA sequences of all ENSRNOG00000009163 retrocopies