Parental gene:

FAM133B, ENSG00000234545

Aliases:None
Description:family with sequence similarity 133, member B [Source:HGNC Symbol;Acc:28629]
Organism:Human (Homo sapiens)
Coordinates:7:92190106..92219708(-)


>ENSG00000234545
ATGGGGAAGCGGGACAATCGGGTGGCCTATATGAACCCAATAGCAATGGCGAGATCAAGGGGTCCAATCCAGTCTTCAGG
GCCAACAATACAGGATTATCTGAATCGACCAAGGCCTACCTGGGAAGAAGTAAAAGAGCAACTAGAAAAGAAAAAGAAAG
GCTCCAAGGCTTTGGCTGAATTTGAAGAAAAAATGAATGAGAACTGGAAGAAAGAACTGGAAAAACACAGGGAGAAATTG
TTAAGTGGAAGTGAGAGCTCATCCAAAAAAAGACAGAGAAAGAAAAAAGAAAAGAAGAAATCTGGTAGGTATTCATCTTC
TTCTTCATCAAGCTCTGATTCTTCCAGCAGTTCTTCTGATTCTGAAGATGAGGATAAGAAACAAGGAAAACGGAGAAAGA
AAAAGAAGAACCGTTCACATAAATCTTCTGAAAGCTCCATGTCAGAAACTGAATCAGACAGTAAGGATAGTTTAAAAAAG
AAAAAGAAGTCAAAAGATGGAACTGAGAAAGAAAAGGATATTAAAGGACTCAGCAAAAAGAGAAAGATGTATTCTGAAGA
TAAACCTTTATCATCTGAGTCCTTGTCAGAATCAGAGTATATTGAGGAGGTGCGAGCAAAAAAGAAGAAAAGCAGTGAAG
AACGAGAAAAAGCAACAGAAAAAACAAAAAAGAAAAAGAAGCATAAGAAACACAGTAAGAAGAAGAAAAAGAAGGCTGCT
AGTTCAAGTCCTGACTCACCATAA

Library Parental gene expression (RPM)
bodymap2_adipose 4 .81 RPM
bodymap2_adrenal 10 .52 RPM
bodymap2_brain 13 .83 RPM
bodymap2_breast 7 .84 RPM
bodymap2_colon 7 .13 RPM
bodymap2_heart 6 .18 RPM
bodymap2_kidney 9 .18 RPM
bodymap2_liver 3 .91 RPM
bodymap2_lung 6 .93 RPM
bodymap2_lymph_node 10 .12 RPM
bodymap2_ovary 12 .43 RPM
bodymap2_prostate 12 .47 RPM
bodymap2_skeletal_muscle 4 .02 RPM
bodymap2_testis 11 .46 RPM
bodymap2_thyroid 11 .73 RPM
bodymap2_white_blood_cells 10 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007438 ortholog_one2one 1 retrogene
retro_amel_102,
Callithrix jacchus ENSCJAG00000013910 ortholog_one2one 3 retrogenes
retro_cjac_1084, retro_cjac_1163, retro_cjac_4095,
Equus caballus ENSECAG00000026810 ortholog_one2one 1 retrogene
retro_ecab_95,
Loxodonta africana ENSLAFG00000029755 ortholog_one2one 1 retrogene
retro_lafr_594,
Myotis lucifugus ENSMLUG00000005933 ortholog_one2one 1 retrogene
retro_mluc_2301,
Macaca mulatta ENSMMUG00000019802 ortholog_one2one 4 retrogenes
retro_mmul_1415, retro_mmul_226, retro_mmul_420, retro_mmul_765,
Mus musculus ENSMUSG00000058503 ortholog_one2one 2 retrogenes
retro_mmus_3481, retro_mmus_3519,
Nomascus leucogenys ENSNLEG00000015333 ortholog_one2one 1 retrogene
retro_nleu_14,
Pongo abelii ENSPPYG00000025825 ortholog_one2one 1 retrogene
retro_pabe_225,
Rattus norvegicus ENSRNOG00000009163 ortholog_one2one 1 retrogene
retro_rnor_2891,
Sus scrofa ENSSSCG00000015317 ortholog_one2one 1 retrogene
retro_sscr_49,
Ictidomys tridecemlineatus ENSSTOG00000028195 ortholog_one2one 1 retrogene
retro_itri_12,
Tupaia belangeri ENSTBEG00000011674 ortholog_one2one 1 retrogene
retro_tbel_1,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_55 82.04 97.98
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2. retro_hsap_577 72.06 57.38
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3. retro_hsap_2336 85.71 82.19
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4. retro_hsap_3179 92.68 83.00
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Download FASTA sequences of all ENSG00000234545 retrocopies