Parental gene:

Derl1, ENSRNOG00000005551

Aliases:Derl1, RGD1311835
Description:derlin-1 [Source:RefSeq peptide;Acc:NP_001014224]
Organism:Rat (Rattus norvegicus)
Coordinates:7:98344207..98366882(-)


>ENSRNOG00000005551
ATGTCGGACATCGGGGACTGGTTCAGGAGCATCCCGGCCATCACGCGCTACTGGTTTGCTGCCACCGTCGCGGTCCCCTT
GATCGGCAAGCTCGCTATTATCAGCCCGGCCTACTTCTTCCTCTGGCCCGAAGCCTTCCTCTATCGCTTCCAGATATGGA
GGCCGTTCACTGCCACCTTTTATTTCCCCGTGGGGCCCGGAACTGGATTTCTTTATTTGGTCAATTTATATTTCTTATAT
CAGTATTCTACACGGCTTGAGGCAGGAGCTTTTGACGGGAGGCCAGCAGACTATTTATTCATGCTTCTCTTCAACTGGAT
CTGCATTGTTATTACTGGCTTAGCCATGGATATGCAGTTGCTGATGATTCCTCTAATCATGTCAGTACTTTACGTCTGGG
CCCAGCTGAACAGAGACCTGATTGTATCATTTTGGTTTGGAACACGATTTAAGGCCTGTTACTTACCTTGGGTTATCCTC
GGATTCAACTATATCATTGGAGGCTCGGTCATCAATGAGCTCATTGGAAACCTTGTCGGACATCTTTATTTCTTCCTGAT
GTTCAGATACCCAATGGATTTGGGAGGAAGGAATTTTCTGTCCACACCTCAGTTTTTGTACCGCTGGCTACCCAGCAGGA
GAGGAGGGGTGTCAGGCTTCGGTGTGCCCCCTGCAAGCATGAGGCGAGCTGCTGATCAGAATGGCGGAGGTGGGAGACAC
AACTGGGGCCAGGGCTTCCGACTTGGAGACCAGTGA

Library Parental gene expression (RPM)
SRP017611_brain 50 .04 RPM
SRP017611_kidney 87 .65 RPM
SRP017611_liver 75 .44 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006519 ortholog_one2one 1 retrogene
retro_amel_364,
Canis familiaris ENSCAFG00000000974 ortholog_one2one 1 retrogene
retro_cfam_754,
Cavia porcellus ENSCPOG00000011870 ortholog_one2one 1 retrogene
retro_cpor_1520,
Myotis lucifugus ENSMLUG00000009085 ortholog_one2one 1 retrogene
retro_mluc_2035,
Mustela putorius furo ENSMPUG00000001132 ortholog_one2one 1 retrogene
retro_mputfur_1082,
Mus musculus ENSMUSG00000022365 ortholog_one2one 1 retrogene
retro_mmus_919,
Sarcophilus harrisii ENSSHAG00000011915 ortholog_one2one 1 retrogene
retro_shar_588,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1206 80.62 62.15
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2. retro_rnor_2717 92.72 82.07
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Download FASTA sequences of all ENSRNOG00000005551 retrocopies