Parental gene:

DERL1, ENSCPOG00000011870

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_51:12590500..12614145(+)


>ENSCPOG00000011870
ATGTCGGACATCGGGGACTGGTTCAGGAGCATCCCGGCCATCACGCGCTACTGGTTCGCTGCCAGCATTGCTGTTCCCTT
GGTTGGCAAACTCGGCCTCATCAGCCCAGCTTACTTATTCTTGTGGCCCGAAGCCTTCCTCTATCGCTTCCAGATTTGGA
GGCCAATCACTGCCACCTTTTATTTCCCTGTGGGTCCAGGAACTGGATTTCTTTATTTGGTCAATTTATATTTCTTGTAT
CAGTATTCTACACGACTTGAAACAGGAGCTTTTGATGGGAGGCCAGCAGACTATTTATTCATGCTTCTCTTTAACTGGAT
TTGCATCGTGATTACCGGCTTGGCAATGGATATGCAGTTGCTGATGATTCCTCTGATCATGTCAGTACTTTATGTCTGGG
CTCAGCTGAACAGAGACATGATGGTATCATTTTGGTTTGGAACACGATTCAAGGCCTGTTATTTACCTTGGGTTATCCTT
GGATTCAACTATATCATCGGAGGCTCGGTGATCAATGAGTTAATTGGAAATCTTGTCGGACATCTTTATTTCTTCCTAAT
GTTCAGATACCCAATGGACTTGGGAGGAAGAAATTTTCTATCTACACCTCAGTTTTTGTACCGCTGGCTGCCCAGTAGGA
GAGGAGGAGTGTCGGGGTTTGGTGTGCCGCCTGCTAGTGTGAGACGAGCTGCTGACCAGAATGGCGGAGGTGGAAGACAC
AACTGGGGCCAGGGCTTTCGACTTGGAGACCAGTGA

Library Parental gene expression (RPM)
SRP017611_brain 16 .22 RPM
SRP017611_kidney 47 .32 RPM
SRP017611_liver 43 .57 RPM
SRP040447_lung 37 .02 RPM
SRP040447_skeletal_muscle 20 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006519 ortholog_one2one 1 retrogene
retro_amel_364,
Canis familiaris ENSCAFG00000000974 ortholog_one2one 1 retrogene
retro_cfam_754,
Myotis lucifugus ENSMLUG00000009085 ortholog_one2one 1 retrogene
retro_mluc_2035,
Mustela putorius furo ENSMPUG00000001132 ortholog_one2one 1 retrogene
retro_mputfur_1082,
Mus musculus ENSMUSG00000022365 ortholog_one2one 1 retrogene
retro_mmus_919,
Rattus norvegicus ENSRNOG00000005551 ortholog_one2one 2 retrogenes
retro_rnor_1206, retro_rnor_2717,
Sarcophilus harrisii ENSSHAG00000011915 ortholog_one2one 1 retrogene
retro_shar_588,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1520 65.35 78.49
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Download FASTA sequences of all ENSCPOG00000011870 retrocopies