Parental gene:

Rbbp7, ENSRNOG00000005157

Aliases:None
Description:Histone-binding protein RBBP7 [Source:UniProtKB/Swiss-Prot;Acc:Q71UF4]
Organism:Rat (Rattus norvegicus)
Coordinates:X:33995672..34012812(-)


>ENSRNOG00000005157
ATGGCGAGTAAAGAGATGTTTGAAGATACTGTGGAGGAGCGTGTCATCAACGAAGAATATAAAATCTGGAAGAAGAATAC
ACCGTTTCTGTATGACCTGGTTATGACCCATGCTCTTCAGTGGCCCAGTCTTACCGTTCAGTGGCTTCCTGAAGTGACTA
AACCAGAAGGAAAGGATTATGCCCTTCATTGGCTAGTGCTGGGTACCCATACATCTGATGAGCAGAATCATCTGGTGGTT
GCTCGAGTTCATATTCCCAATGATGATGCACAGTTTGATGCTTCCCATTGTGACAGTGACAAGGGAGAATTTGGTGGCTT
TGGTTCTGTAACAGGAAAAATTGAATGTGAAATTAAAATTAATCATGAAGGAGAAGTAAATCGCGCTCGTTATATGCCAC
AGAACCCACACATCATTGCCACAAAAACACCATCTTCTGATGTTTTGGTTTTTGACTATACAAAACACCCTGCAAAACCA
GATCCAAGTGGAGAGTGTAATCCTGATCTTAGATTAAGAGGTCACCAAAAGGAAGGCTATGGTCTCTCCTGGAATTCTAA
TTTGAGTGGACATCTCCTGAGTGCATCTGATGACCATACTGTCTGCCTCTGGGATATAAATGCAGGACCAAAGGAAGGCA
AAATTGTGGATGCTAAAGCAATCTTTACTGGCCACTCAGCTGTTGTAGAGGATGTGGCCTGGCATCTGCTGCATGAGTCC
TTGTTTGGATCTGTTGCTGATGATCAGAAACTTATGATATGGGACACCAGATCCAATACTACTTCTAAGCCCAGCCATTT
GGTGGATGCACACACTGCGGAGGTCAACTGCCTCTCATTCAATCCCTACAGCGAGTTTATTCTGGCAACTGGCTCTGCAG
ATAAGACTGTAGCTTTATGGGACCTGCGTAATCTGAAACTAAAACTCCACACCTTTGAATCCCATAAGGATGAAATTTTT
CAGGTCCACTGGTCTCCACATAATGAAACTATTCTGGCTTCAAGTGGTACTGATCGCCGCCTGAATGTGTGGGATTTAAG
TAAAATTGGAGAAGAACAATCAGCAGAAGATGCAGAGGATGGGCCTCCAGAGCTCCTGTTTATTCATGGAGGACACACTG
CCAAGATTTCTGACTTCAGTTGGAACCCCAATGAACCTTGGGTCATTTGCTCTGTGTCTGAAGATAACATCATGCAGATA
TGGCAAATGGCTGAAAATATTTACAATGATGAAGAGTCAGATGTCACGACATCGGAACTGGAGGGGCAAGGATCTTAA

Library Parental gene expression (RPM)
SRP017611_brain 94 .33 RPM
SRP017611_kidney 96 .44 RPM
SRP017611_liver 41 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002820 ortholog_one2one 1 retrogene
retro_btau_1579,
Mus musculus ENSMUSG00000031353 ortholog_one2one 1 retrogene
retro_mmus_3529,
Oryctolagus cuniculus ENSOCUG00000000683 ortholog_one2one 1 retrogene
retro_ocun_1939,
Otolemur garnettii ENSOGAG00000014995 ortholog_one2one 1 retrogene
retro_ogar_2220,
Petromyzon marinus ENSPMAG00000007189 ortholog_one2many 1 retrogene
retro_pmar_26,
Pan troglodytes ENSPTRG00000021702 ortholog_one2one 5 retrogenes
retro_ptro_1802, retro_ptro_1909, retro_ptro_2226, retro_ptro_2987, retro_ptro_896,
Rattus norvegicus ENSRNOG00000021492 within_species_paralog 1 retrogene
retro_rnor_1270,
Sorex araneus ENSSARG00000008079 ortholog_one2one 3 retrogenes
retro_sara_308, retro_sara_571, retro_sara_602,
Tupaia belangeri ENSTBEG00000010151 ortholog_one2one 2 retrogenes
retro_tbel_3031, retro_tbel_4341,
Tarsius syrichta ENSTSYG00000002385 ortholog_one2one 4 retrogenes
retro_tsyr_1608, retro_tsyr_1838, retro_tsyr_1957, retro_tsyr_427,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1182 84.64 80.94
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Download FASTA sequences of all ENSRNOG00000005157 retrocopies