Parental gene:

Rbbp7, ENSMUSG00000031353

Aliases:Rbbp7, AA409861, AI173248, AU019541, BB114024, mRbAp46
Description:retinoblastoma binding protein 7 [Source:MGI Symbol;Acc:MGI:1194910]
Organism:Mouse (Mus musculus)
Coordinates:X:162760401..162779092(+)


>ENSMUSG00000031353
ATGGCGAGTAAAGAGATGTTTGAAGATACTGTGGAGGAGCGTGTCATCAACGAAGAGTATAAAATCTGGAAGAAGAATAC
ACCGTTTCTGTATGACCTGGTTATGACCCATGCTCTTCAGTGGCCCAGTCTTACCGTTCAGTGGCTTCCTGAAGTGACTA
AACCAGAAGGAAAGGATTATGCCCTTCATTGGCTAGTGCTGGGCACTCATACATCTGATGAGCAGAACCATCTGGTGGTT
GCTCGAGTTCATATTCCCAATGATGATGCACAGTTTGATGCTTCCCACTGTGACAGTGACAAGGGAGAATTCGGTGGCTT
TGGTTCTGTAACAGGGAAAATTGAATGTGAAATTAAAATTAACCATGAAGGAGAAGTGAATCGTGCTCGTTATATGCCAC
AGAATCCTCACATCATTGCCACAAAAACACCATCTTCTGATGTTTTGGTTTTTGACTATACAAAACACCCTGCAAAACCA
GATCCAAGTGGAGAATGTAATCCTGATCTTAGATTAAGAGGTCACCAAAAGGAAGGCTATGGTCTTTCCTGGAATTCTAA
TCTGAGTGGGCATCTCCTGAGTGCATCTGATGACCATACTGTCTGCCTGTGGGATATAAATGCAGGACCAAAGGAAGGCA
AAATTGTGGATGCTAAAGCAATCTTTACTGGCCACTCAGCTGTTGTAGAGGATGTGGCCTGGCATCTGCTGCATGAGTCC
TTGTTTGGATCTGTTGCTGATGATCAGAAACTTATGATATGGGACACCAGATCCAATACCACTTCTAAGCCGAGCCATTT
GGTGGATGCACACACCGCTGAGGTCAACTGCCTCTCATTCAATCCCTACAGCGAGTTCATTCTGGCAACTGGCTCTGCAG
ATAAGACTGTAGCTTTATGGGACCTGCGTAATCTGAAACTAAAACTCCACACCTTTGAATCGCATAAGGATGAAATTTTC
CAGGTCCACTGGTCTCCACATAATGAAACTATTCTGGCCTCAAGTGGTACTGATCGCCGCCTGAATGTGTGGGATTTAAG
TAAAATTGGAGAAGAACAATCAGCAGAAGATGCAGAAGATGGGCCTCCAGAGCTCCTGTTTATTCATGGAGGGCACACTG
CCAAGATTTCTGACTTCAGCTGGAATCCCAATGAACCTTGGGTCATTTGCTCTGTGTCTGAAGATAACATCATGCAGATA
TGGCAGATGGCTGAAAATATTTACAATGATGAAGAGTCAGATGTCACGGCATCGGAACTGGAGGGGCAAGGATCTTAA

Library Parental gene expression (RPM)
SRP007412_brain 97 .49 RPM
SRP007412_cerebellum 68 .78 RPM
SRP007412_heart 101 .80 RPM
SRP007412_kidney 93 .96 RPM
SRP007412_liver 48 .17 RPM
SRP007412_testis 48 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002820 ortholog_one2one 1 retrogene
retro_btau_1579,
Mus musculus ENSMUSG00000040782 within_species_paralog 1 retrogene
retro_mmus_3678,
Mus musculus ENSMUSG00000057236 within_species_paralog 1 retrogene
retro_mmus_356,
Oryctolagus cuniculus ENSOCUG00000000683 ortholog_one2one 1 retrogene
retro_ocun_1939,
Otolemur garnettii ENSOGAG00000014995 ortholog_one2one 1 retrogene
retro_ogar_2220,
Petromyzon marinus ENSPMAG00000007189 ortholog_one2many 1 retrogene
retro_pmar_26,
Pan troglodytes ENSPTRG00000021702 ortholog_one2one 5 retrogenes
retro_ptro_1802, retro_ptro_1909, retro_ptro_2226, retro_ptro_2987, retro_ptro_896,
Rattus norvegicus ENSRNOG00000005157 ortholog_one2one 1 retrogene
retro_rnor_1182,
Sorex araneus ENSSARG00000008079 ortholog_one2one 3 retrogenes
retro_sara_308, retro_sara_571, retro_sara_602,
Tupaia belangeri ENSTBEG00000010151 ortholog_one2one 2 retrogenes
retro_tbel_3031, retro_tbel_4341,
Tarsius syrichta ENSTSYG00000002385 ortholog_one2one 4 retrogenes
retro_tsyr_1608, retro_tsyr_1838, retro_tsyr_1957, retro_tsyr_427,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_3529 93.05 97.88
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Download FASTA sequences of all ENSMUSG00000031353 retrocopies