Parental gene:

ENSPTRG00000007132

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:15:57724846..57774304(-)


>ENSPTRG00000007132
ATGGGCCGCCAATCCTTCAAAATGTCTACTGTTCACGAAATCCTGTGCAAGCTCAGCTTGGAGGGTGATCACTCTACACC
CCCAAGCGCATATGGGTCTGTCAAAGCCTATACTAACTTTGATGCTGAGCGGGATGCTTTGAACATTGAAACAGCCATCA
AGACCAAAGGTGTGGATGAGGTCACCATTGTCAACATTTTGACCAACCGCAGCAATGCGCAGAGACAGGATATTGCCTTC
GCCTACCAGAGAAGGACCAAAAAGGAACTTGCATCAGCACTGAAGTCAGCCTTATCTGGCCACCTGGAGACGGTGATTTT
GGGCCTATTGAAGACACCTGCTCAGTATGACGCTTCTGAGCTAAAAGCTTCCATGAAGGGACTGGGAACCGACGAGGACT
CTCTCATTGAGATCATCTGCTCCAGAACCAACCAGGAGCTGCAGGAAATTAACAGAGTCTACAAGGAAATGTACAAGACT
GATCTGGAGAAAGACATTATTTCGGACACATCTGGTGACTTCCGCAAGCTGATGGTTGCTCTGGCAAAGGGTAGAAGAGC
AGAGGATGGCTCTGTCATTGATTATGAACTGATTGACCAAGATGCCCGGGATCTCTATGACGCTGGAGTGAAGAGGAAAG
GAACTGATGTTCCCAAGTGGATCAGCATCATGACCGAGCGGAGCGTGCCCCACCTCCAGAAAGTATTTGATAGGTACAAG
AGTTACAGCCCTTATGACATGTTGGAAAGCATCAGGAAAGAGGTTAAAGGAGACCTGGAAAATGCTTTCCTGAACCTGGT
TCAGTGCATTCAGAACAAGCCCCTGTATTTTGCTGATCGGCTGTACGACTCCATGAAGGGCAAGGGGACGCGAGATAAGG
TCCTGATCAGAATCATGGTCTCCCGCAGTGAAGTGGACATGTTGAAAATTAGGTCTGAATTCAAGAGAAAGTACGGCAAG
TCCCTGTACTATTATATCCAGCAAGACACTAAGGGCGACTACCAGAAAGCGCTGCTGTACCTGTGTGGTGGAGACGACTG
A

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 18 .88 RPM
SRP007412_cerebellum 21 .76 RPM
SRP007412_heart 127 .84 RPM
SRP007412_kidney 208 .35 RPM
SRP007412_liver 276 .41 RPM
SRP007412_testis 64 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008055 possible_ortholog 2 retrogenes
retro_amel_1531, retro_amel_1836,
Bos taurus ENSBTAG00000009615 possible_ortholog 2 retrogenes
retro_btau_634, retro_btau_985,
Canis familiaris ENSCAFG00000016686 possible_ortholog 3 retrogenes
retro_cfam_1631, retro_cfam_367, retro_cfam_707,
Choloepus hoffmanni ENSCHOG00000012143 possible_ortholog 3 retrogenes
retro_chof_1028, retro_chof_1965, retro_chof_815,
Equus caballus ENSECAG00000012670 possible_ortholog 1 retrogene
retro_ecab_759,
Homo sapiens ENSG00000182718 ortholog_one2many 3 retrogenes
retro_hsap_3114, retro_hsap_4150, retro_hsap_580,
Gorilla gorilla ENSGGOG00000009738 ortholog_one2many 3 retrogenes
retro_ggor_2137, retro_ggor_2788, retro_ggor_515,
Macropus eugenii ENSMEUG00000008980 ortholog_one2many 3 retrogenes
retro_meug_1000, retro_meug_312, retro_meug_389,
Myotis lucifugus ENSMLUG00000002464 possible_ortholog 3 retrogenes
retro_mluc_1569, retro_mluc_2223, retro_mluc_2431,
Monodelphis domestica ENSMODG00000011604 ortholog_one2many 1 retrogene
retro_mdom_1471,
Mustela putorius furo ENSMPUG00000000762 possible_ortholog 2 retrogenes
retro_mputfur_73, retro_mputfur_79,
Nomascus leucogenys ENSNLEG00000011678 ortholog_one2many 2 retrogenes
retro_nleu_769, retro_nleu_802,
Otolemur garnettii ENSOGAG00000009952 possible_ortholog 1 retrogene
retro_ogar_3510,
Pongo abelii ENSPPYG00000006526 ortholog_one2many 2 retrogenes
retro_pabe_2572, retro_pabe_607,
Pteropus vampyrus ENSPVAG00000011401 possible_ortholog 1 retrogene
retro_pvam_389,
Tupaia belangeri ENSTBEG00000001276 possible_ortholog 1 retrogene
retro_tbel_3335,
Tarsius syrichta ENSTSYG00000003719 possible_ortholog 1 retrogene
retro_tsyr_2086,
Tursiops truncatus ENSTTRG00000007705 possible_ortholog 1 retrogene
retro_ttru_1725,
Vicugna pacos ENSVPAG00000007888 possible_ortholog 2 retrogenes
retro_vpac_241, retro_vpac_27,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_81 97.66 98.84
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ptro_2106 92.78 52.02
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000007132 retrocopies