Parental gene:

ANXA2, ENSBTAG00000009615

Aliases:None
Description:Annexin A2 [Source:UniProtKB/Swiss-Prot;Acc:P04272]
Organism:Cow (Bos taurus)
Coordinates:10:49860061..49904536(+)


>ENSBTAG00000009615
ATGTCTACCGTTCATGAAATTCTGTGCAAGCTCAGTTTGGAGGGTGATCACTCCACACCTCCAAGTGCATACGGGTCAGT
CAAAGCGTACACTAACTTTGATGCTGAGCGGGATGCTCTGAACATTGAAACAGCCATCAAGACCAAAGGTGTGGATGAGG
TCACCATCGTCAACATCCTGACCAACCGCAGCAATGAACAGAGACAGGATATTGCCTTCGCCTACCAGAGAAGGACCAAG
AAGGAACTTGCATCAGCACTGAAGTCAGCCTTGTCTGGCCACCTGGAGACAGTGATTTTGGGCCTATTGAAAACACCTGC
TCAGTATGATGCTTCTGAGCTGAAAGCGTCCATGAAGGGGCTGGGGACTGATGAGGACTCTCTCATTGAGATCATCTGCT
CAAGGACCAACCAGGAGCTGCAGGAAATCAACAGAGTCTACAAGGAAATGTACAAGACCGATCTGGAGAAGGACATCGTT
TCCGACACATCTGGCGACTTCCGCAAGCTGATGGTCGCCCTCGCAAAGGGTCGGAGAGCAGAGGATGGCTCTGTCATTGA
TTATGAACTGATTGACCAGGATGCCAGGGATCTCTATGATGCTGGTGTGAAGAGGAAAGGAACTGATGTTCCCAAGTGGA
TCAGCATCATGACCGAGCGGAGCGTGTGCCACCTCCAGAAAGTATTTGAAAGGTACAAGAGCTACAGCCCTTACGACATG
CTGGAGAGCATCAAGAAGGAGGTCAAAGGAGACCTGGAAAATGCCTTTCTGAATCTGGTTCAGTGCATTCAGAACAAGCC
CCTGTATTTTGCTGACAGACTGTATGACTCCATGAAGGGCAAGGGCACTCGCGACAAGGTCCTGATTAGAATCATGGTCT
CGCGCAGTGAAGTGGACATGTTGAAAATTAGATCTGAGTTCAAGAAAAAGTACGGCAAGTCCCTGTACTACTATATTCAG
CAAGACACCAAGGGCGACTACCAGAAAGCGCTGCTGTACCTGTGTGGTGGGGATGACTGA

Library Parental gene expression (RPM)
ERP005899_liver 49 .46 RPM
ERP005899_muscle 424 .37 RPM
SRP017611_brain 28 .78 RPM
SRP017611_kidney 119 .97 RPM
SRP017611_liver 111 .15 RPM
SRP030211_testis 15 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008055 ortholog_one2one 2 retrogenes
retro_amel_1531, retro_amel_1836,
Bos taurus ENSBTAG00000015978 within_species_paralog 1 retrogene
retro_btau_544,
Bos taurus ENSBTAG00000021746 other_paralog 1 retrogene
retro_btau_308,
Canis familiaris ENSCAFG00000016686 possible_ortholog 3 retrogenes
retro_cfam_1631, retro_cfam_367, retro_cfam_707,
Equus caballus ENSECAG00000012670 ortholog_one2one 1 retrogene
retro_ecab_759,
Felis catus ENSFCAG00000007862 possible_ortholog 2 retrogenes
retro_fcat_594, retro_fcat_709,
Macropus eugenii ENSMEUG00000008980 ortholog_one2one 3 retrogenes
retro_meug_1000, retro_meug_312, retro_meug_389,
Monodelphis domestica ENSMODG00000011604 ortholog_one2one 1 retrogene
retro_mdom_1471,
Mustela putorius furo ENSMPUG00000000762 possible_ortholog 2 retrogenes
retro_mputfur_73, retro_mputfur_79,
Pan troglodytes ENSPTRG00000007132 possible_ortholog 2 retrogenes
retro_ptro_2106, retro_ptro_81,
Tursiops truncatus ENSTTRG00000007705 ortholog_one2one 1 retrogene
retro_ttru_1725,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_634 67.76 53.69
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2. retro_btau_985 79.34 97.64
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Download FASTA sequences of all ENSBTAG00000009615 retrocopies