Parental gene:

ENSFCAG00000007862

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:B3:46432743..46473212(+)


>ENSFCAG00000007862
TCTTTCAAAATGTCTACTGTTCACGAAATTCTCTGCAAGCTCAGCTTGGAGGGTGATCACTCCACTCCCCCAAGCGCATA
CGGGTCGGTCAAAGCATACACCAATTTTGATGCTGAGCGTGATGCTCTGAACATTGAAACGGCCATCAAGACCAAAGGTG
TGGATGAGGTCACCATCGTCAACATTTTGACCAACCGCAGCAATGAACAGAGACAGGATATTGCCTTCGCCTACCAGAGA
AGGACCAAAAAGGAACTTACATCAGCACTGAAGTCAGCCTTGTCCGGCCACCTGGAGACCGTGATTTTGGGCCTCTTGAA
AACACCTGCTCAGTATGATGCTTCTGAGCTGAAAGCCTCCATGAAGGGGCTGGGGACTGATGAGGACTCCCTCATTGAGA
TCATCTGCTCAAGGACCAACCAAGAGCTTCAGGAAATTAACAGAGTCTACAAGGAAATGTACAAGACTGATCTGGAGAAA
GACATCATTTCTGACACATCCGGTGACTTCCGCAAGCTGATGGTTGCCCTTGCAAAGGGTAGAAGAGCAGAGGATGGCTC
CGTCATTGATTATGAACTGATTGACCAGGATGCTCGGGACCTCTATGATGCTGGAGTGAAGAGGAAAGGAACAGACGTGC
CCAAGTGGATCAGCATCATGACCGAGCGGAGTGTGTGTCACCTCCAGAAAGTGTTTGACAGGTACAAGAGCTACAGCCCT
TATGACATGCTGGAGAGCATCAAGAAAGAGGTCAAAGGAGACCTGGAAAATGCTTTCCTGAACCTGGTCCAGTGCATTCA
GAACAAGCCCCTGTATTTTGCTGACCGACTGTACGACTCCATGAAGGGCAAGGGGACTCGCGACAAAGTCCTGATTAGAA
TCATGGTCTCTCGCAGTGAAGTGGACATGTTGAAAATTAGGTCTGAATTCAAGAGGAAGTACGGCAAGTCCCTGTACTAC
TGCATCCAGCAAGACACGAAGGGCGACTACCAGAAAGCGCTGCTGTACCTGTGCGGTGGGGATGAC

Library Parental gene expression (RPM)
SRP017611_brain 15 .49 RPM
SRP017611_kidney 124 .08 RPM
SRP017611_liver 84 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008055 possible_ortholog 2 retrogenes
retro_amel_1531, retro_amel_1836,
Bos taurus ENSBTAG00000009615 possible_ortholog 2 retrogenes
retro_btau_634, retro_btau_985,
Canis familiaris ENSCAFG00000016686 possible_ortholog 3 retrogenes
retro_cfam_1631, retro_cfam_367, retro_cfam_707,
Choloepus hoffmanni ENSCHOG00000012143 possible_ortholog 3 retrogenes
retro_chof_1028, retro_chof_1965, retro_chof_815,
Equus caballus ENSECAG00000012670 possible_ortholog 1 retrogene
retro_ecab_759,
Macropus eugenii ENSMEUG00000008980 ortholog_one2many 3 retrogenes
retro_meug_1000, retro_meug_312, retro_meug_389,
Myotis lucifugus ENSMLUG00000002464 possible_ortholog 3 retrogenes
retro_mluc_1569, retro_mluc_2223, retro_mluc_2431,
Monodelphis domestica ENSMODG00000011604 ortholog_one2many 1 retrogene
retro_mdom_1471,
Mustela putorius furo ENSMPUG00000000762 possible_ortholog 2 retrogenes
retro_mputfur_73, retro_mputfur_79,
Otolemur garnettii ENSOGAG00000009952 possible_ortholog 1 retrogene
retro_ogar_3510,
Pteropus vampyrus ENSPVAG00000011401 possible_ortholog 1 retrogene
retro_pvam_389,
Tupaia belangeri ENSTBEG00000001276 possible_ortholog 1 retrogene
retro_tbel_3335,
Tarsius syrichta ENSTSYG00000003719 possible_ortholog 1 retrogene
retro_tsyr_2086,
Tursiops truncatus ENSTTRG00000007705 possible_ortholog 1 retrogene
retro_ttru_1725,
Vicugna pacos ENSVPAG00000007888 possible_ortholog 2 retrogenes
retro_vpac_241, retro_vpac_27,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_594 75.35 62.57
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2. retro_fcat_709 72.05 65.79
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Download FASTA sequences of all ENSFCAG00000007862 retrocopies