Parental gene:

SNX6, ENSPTRG00000006253

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:14:33459981..33532005(-)


>ENSPTRG00000006253
ATGCGCGCCTGCGCCGGCCCTCGCCTCGGAGCAGCCATGATGGAAGGCCTGGACGACGGCCCGGACTTCCTCTCAGAAGA
GGACCGCGGACTTAAAGCAATAAATGTAGATCTTCAAAGTGATGCTGCTCTGCAGGTGGACATTTCTGATGCTCTTAGTG
AGCGGGATAAAGTAAAATTCACTGTTCACACAAAGAGTTCATTGCCAAATTTTAAACAAAACGAGTTTTCAGTTGTTCGG
CAACACGAGGAATTTATCTGGCTTCATGATTCCTTTGTTGAAAATGAAGACTATGCAGGTTATATCATTCCACCAGCACC
ACCAAGACCTGATTTTGATGCTTCAAGGGAAAAACTACAGAAGCTTGGTGAAGGAGAAGGGTCAATGACGAAGGAAGAAT
TCACAAAGATGAAACAGGAACTGGAAGCTGAATATTTGGCAATATTCAAGAAGACAGTTGCGATGCATGAAGTGTTCCTG
TGTCGTGTGGCAGCACATCCTATTTTGAGAAAAGATTTAAATTTCCATGTCTTCTTGGAATATAATCAAGATTTGAGTGT
GCGAGGAAAAAATAAAAAAGAGAAACTTGAAGACTTCTTTAAAAACATGGTTAAATCAGCAGATGGAGTAATCGTTTCAG
GAGTAAAGGATGTAGATGATTTCTTTGAGCATGAACGAACATTTCTTTTGGAATATCATAACCGAGTTAAGGATGCATCT
GCTAAATCTGATAGAATGACAAGATCCCACAAAAGTGCTGCAGATGATTACAATAGAATTGGTTCTTCATTATATGCTTT
AGGAACTCAGGATTCTACAGATATATGCAAGTTTTTTCTCAAAGTTTCAGAACTGTTCGATAAAACAAGAAAAATAGAAG
CACGAGTGTCTGCTGATGAAGACCTCAAACTTTCTGATCTTTTAAAATATTACTTAAGAGAATCTCAAGCTGCTAAGGAT
CTCCTGTATCGAAGGTCTAGGTCACTAGTGGATTATGAAAATGCTAATAAAGCACTGGATAAAGCAAGAGCAAAAAATAA
AGATGTTCTACAGGCCGAAACTTCCCAACAATTATGTTGTCAGAAATTTGAAAAAATATCTGAGTCTGCAAAACAAGAAC
TTATAGATTTTAAGACAAGAAGAGTTGCTGCATTCAGAAAAAATTTAGTGGAACTGGCAGAGTTAGAACTGAAGCATGCA
AAGGGTAATCTACAGTTGCTGCAGAACTGCCTGGCAGTGTTAAATGGAGACACATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 17 .57 RPM
SRP007412_cerebellum 15 .45 RPM
SRP007412_heart 30 .49 RPM
SRP007412_kidney 26 .94 RPM
SRP007412_liver 11 .72 RPM
SRP007412_testis 25 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012873 ortholog_one2one 1 retrogene
retro_btau_870,
Cavia porcellus ENSCPOG00000006862 ortholog_one2one 1 retrogene
retro_cpor_1145,
Nomascus leucogenys ENSNLEG00000003310 ortholog_one2one 1 retrogene
retro_nleu_3063,
Pongo abelii ENSPPYG00000005736 ortholog_one2one 2 retrogenes
retro_pabe_1668, retro_pabe_1698,
Pan troglodytes ENSPTRG00000013278 within_species_paralog 2 retrogenes
retro_ptro_2052, retro_ptro_717,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1362 85.65 55.98
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Download FASTA sequences of all ENSPTRG00000006253 retrocopies