Parental gene:

SNX6, ENSPPYG00000005736

Aliases:None
Description:sorting nexin 6 [Source:HGNC Symbol;Acc:14970]
Organism:Orangutan (Pongo abelii)
Coordinates:14:34294574..34360298(-)


>ENSPPYG00000005736
ATCCGCGCCTGCGCCGGCCCTCGCCTCAGAGCAGCCATGATGGAAGGCCTGGACGACGGCCCGGACTTCCTCTCAGAAGA
GGACCGCGGACTTAAAGCAATAAATGTAGATCTTCAAAGTGATGCTGCTCTGCAGGTGGACATTTCTGATGCTCTTAGTG
AGCGGGATAAAGTAAAATTCACTGTTCACACAAAGAGTTCATTGCCAAATTTTAAACAAAACGAGTTTTCAGTTGTTCGG
CAACATGAGGAATTTATCTGGCTTCATGATTCCTTTGTTGAAAATGAAGACTATGCAGGTTATATCATTCCACCAGCACC
ACCAAGACCTGATTTTGATGCTTCAAGGGAAAAGCTACAGAAGCTTGGTGAAGGAGAAGGGTCAATGACGAAGGAAGAAT
TCACAAAGATGAAACAGGAACTGGAAGCTGAATATTTGGCAATATTCAAGAAGACAGTTGCGATGCATGAAGTGTTCCTG
TGTCGTGTGGCAGCACATCCTATTTTGAGAAAAGATTTAAATTTCCATGTCTTCTTGGAATATAATCAAGATTTGAGTGT
GCGAGGAAAAAATAAAAAAGAGAAACTTGAAGACTTCTTTAAAAACATGGTTAAATCAGCAGATGGAGTAATCGTTTCAG
GAGTAAAGGATGTAGATGATTTCTTTGAGCATGAACGAACATTTCTTTTGGAATATCATAACCGAGTTAAGGATGCATCT
GCTAAATCTGATAGAATGACAAGATCCCACAAAAGTGCTGCAGATGATTACAATAGAATTGGCTCTTCATTATATGCTTT
AGGAACTCAGGATTCTACAGATATATGCAAGTTTTTTCTCAAAGTTTCAGAACTGTTCGATAAAACAAGAGATCTCCTGT
ATCGAAGGTCTAGGTCACTAGTGGATTATGAAAATGCTAATAAAGCACTGGATAAAGCAAGAGCAAAAAATAAAGATGTT
CTGCAGGCCGAAACTTCCCAACAATTATGTTGTCAGAAATTTGAAAAAATATCTGAGTCTGCAAAACAAGAACTTATAGA
TTTTAAGACAAGAAGAGTTGCTGCATTCAGAAAAAATTTAGTGGAACTGGCAGAGTTAGAACTGAAGCATGCAAAGGGTA
ATCTACAGTTGCTGCAGAACTGCCTGGCAGTGTTAAATGGAGACACATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 7 .13 RPM
SRP007412_cerebellum 12 .89 RPM
SRP007412_heart 7 .83 RPM
SRP007412_kidney 16 .54 RPM
SRP007412_liver 10 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012873 ortholog_one2one 1 retrogene
retro_btau_870,
Cavia porcellus ENSCPOG00000006862 ortholog_one2one 1 retrogene
retro_cpor_1145,
Nomascus leucogenys ENSNLEG00000003310 ortholog_one2one 1 retrogene
retro_nleu_3063,
Pongo abelii ENSPPYG00000010730 within_species_paralog 2 retrogenes
retro_pabe_2442, retro_pabe_877,
Pan troglodytes ENSPTRG00000006253 ortholog_one2one 1 retrogene
retro_ptro_1362,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1668 85.02 72.49
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_pabe_1698 86.41 72.49
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000005736 retrocopies