Parental gene: | ATP5F1, ENSPTRG00000001099 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 1:125359252..125373247(-) |
>ENSPTRG00000001099
ATGCTGTCCCGGGTGGTACTTTCCGCCGCCGCCACAGCGGCCCCCTCTCTGAAGAATGCAGCCTTCCTAGGTCCAGGGGT
ATTGCAGGCAACAAGGACCTTTCATACAGGGCAGCCACACCTTGTCCCTGTACCACCTCTTCCTGAATACGGAGGAAAAG
TTCGTTATGGACTGATCCCTGAGGAATTCTTCCAGTTTCTTTATCCTAAAACTGGTGTAACAGGACCCTATGTACTCGGA
ACTGGGCTTATCTTGTACGCTTTATCCAAAGAAATATACGTGATTAGCGCAGAGACCTTCACTGCCCTATCAGTACTAGG
TGTAATGGTCTATGGAATTAAAAAATATGGTCCCTTTGTTGCAGACTTTGCTGATAAACTCAATGAGCAAAAACTTGCCC
AACTAGAAGAGGCGAAGCAGGCTTCCATCCAACACATCCAGAATGCAATTGATATGGAGAAGTCACAACAGGCACTGGTT
CAGAAGCGCCATTACCTTTTTGATGTGCAAAGGAATAACATTGCTATGGCTTTGGAAGTTACTTACCGGGAACGACTGTA
TAGAGTATATAAGGAAGTAAAGAATCGCCTGGACTATCATATATCTGTGCAGAACATGATGCGTCGAAAGGAACAAGAAC
ACATGATAAATTGGGTGGAGAAGCACGTGGTGCAAAGCATCTCCACACAGCAGGAAAAGGAGACAATTGCCAAGTGCATT
GCGGACCTAAAGCTGCTGGCAAAGAAGGCTCAAGCACAGCCAGTTATGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 72 .78 RPM |
| SRP007412_cerebellum | 40 .29 RPM |
| SRP007412_heart | 127 .28 RPM |
| SRP007412_kidney | 91 .45 RPM |
| SRP007412_liver | 31 .03 RPM |
| SRP007412_testis | 48 .79 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000005433 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000006441 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000013353 | ortholog_one2many | 9 retrogenes | |
| Cavia porcellus | ENSCPOG00000014070 | ortholog_one2one | 3 retrogenes | |
| Equus caballus | ENSECAG00000018599 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000010713 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000028321 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000116459 | ortholog_one2one | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000005215 | ortholog_one2one | 6 retrogenes | |
| Loxodonta africana | ENSLAFG00000004809 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000011992 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012417 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003313 | ortholog_one2many | 3 retrogenes | |
| Mus musculus | ENSMUSG00000000563 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000003971 | ortholog_one2one | 8 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000007809 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011486 | ortholog_one2many | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000001032 | ortholog_one2one | 3 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000010604 | ortholog_one2one | 3 retrogenes | |
| Sorex araneus | ENSSARG00000002107 | ortholog_one2one | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000013185 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000007630 | ortholog_one2one | 3 retrogenes | |
| Tarsius syrichta | ENSTSYG00000000420 | ortholog_one2one | 5 retrogenes | |
| Tursiops truncatus | ENSTTRG00000001546 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000000206 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_578 | 75.34 | 85.94 | Please wait, loading  |
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| 2. | retro_ptro_1154 | 76.88 | 62.11 | Please wait, loading |
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| 3. | retro_ptro_1305 | 97.97 | 57.81 | Please wait, loading |
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| 4. | retro_ptro_2553 | 68.12 | 81.03 | Please wait, loading |
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| 5. | retro_ptro_2586 | 82.03 | 99.61 | Please wait, loading |
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Download FASTA sequences of all ENSPTRG00000001099 retrocopies