Parental gene:

ST13, ENSPSIG00000004553

Aliases:None
Description:suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) [Source:HGNC Symbol;Acc:11343]
Organism:Chinese softshell turtle (Pelodiscus sinensis)
Coordinates:JH209111.1:1139567..1201058(-)


>ENSPSIG00000004553
ATGACCCGCGTAGCTGCAGCAGTTGCCCCTGTTCCTCATCTGCCCGCGGTGCTACTTCAGAGCGACTTCGGAAACATGGG
AGGTACTATACCACCTGCTCCGGATAATGCCTCTGCAGAGACAGTGAAGGACAAAACAGAGAAGCAGCCAGAGGAGCCAG
TTAAGTCGCCAGAGCCCGAGAGTGAGGAGAGTGACTTAGAAATTGACAACGAGGGGGTGATTGAACCAGACAAGGATGAT
CCCCAAGAAATGGGAGATGAAAATGTGGAGGTAACTGAAGAGATGATGGACCAGGCTGATGAGAAGAAGATAGAGGGCAT
CCATGCCCTAGGTGAAGGTGAACTTCAGAAAGCTATTGACTTGTTCACTGAAGCAATCAAGTTGAATCCTCATTTGGCCA
TCTTGTATGCTAAGCGAGCCAGTGTCTTTGTGAAACTACAGAAACCAAATGCTGCCATTAGAGACTGTGACAGAGCCATT
CAAATAAACCCAGATTCAGCACAAACCTACAAATGGCGAGGGAAAGCTCACAGACTCCTGGGTCACTGGGAGGAGGCGGT
ACATGACCTTGCATTGGCTTGTAAACTGGATTATGATGAAGAAGCTAGTGCCATGCTGAAGGAGGTGCAGCCAAGAGCTC
AGAAGATTGTTGAACATCGCAGGAAGTATGAGCGCAAGCGTGAAGAAAAAGAAATCAAGGAAAGGCTGGAGAGGGTGAAG
AAAGCCCGAGAGGAACATGAGAGAGCACAGAGGGAGGAAGAATCCCGGCAACAGGCAGGAGGAGCTCAGTTTGGTGGCTT
TCCAGGTGGGTTTCCTGGAGGAATGCCTGGAGGTATGCCAGGCATGGCAGGGATGCCCGGTCTCAATGAAATTCTTAGCG
ATCCAGAAGTTCTTGCAGCCATGCAGGATCCAGAAGTTATGGTTGCATTCCAAGATGTTGCCCAGAACCCAGCAAATATG
TCCAAGTACCAGAACAACCCCAAGGTCATGAATCTTATCAGCAAACTGTCAGCCAAATTTGGAAGTCAACCATAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000005227 ortholog_one2one 1 retrogene
retro_acar_2,
Ailuropoda melanoleuca ENSAMEG00000013880 possible_ortholog 1 retrogene
retro_amel_135,
Bos taurus ENSBTAG00000006202 possible_ortholog 4 retrogenes
retro_btau_254, retro_btau_427, retro_btau_621, retro_btau_658,
Canis familiaris ENSCAFG00000001139 possible_ortholog 14 retrogenes
retro_cfam_1029, retro_cfam_1101, retro_cfam_1122, retro_cfam_1239, retro_cfam_1467, retro_cfam_1830, retro_cfam_1950, retro_cfam_1958, retro_cfam_247, retro_cfam_262, retro_cfam_582, retro_cfam_808, retro_cfam_901, retro_cfam_969,
Callithrix jacchus ENSCJAG00000004644 possible_ortholog 11 retrogenes
retro_cjac_1843, retro_cjac_1953, retro_cjac_2177, retro_cjac_2275, retro_cjac_2789, retro_cjac_3123, retro_cjac_3570, retro_cjac_4019, retro_cjac_488, retro_cjac_640, retro_cjac_685,
Cavia porcellus ENSCPOG00000002290 possible_ortholog 4 retrogenes
retro_cpor_1394, retro_cpor_1477, retro_cpor_166, retro_cpor_961,
Felis catus ENSFCAG00000011847 possible_ortholog 2 retrogenes
retro_fcat_920, retro_fcat_987,
Gorilla gorilla ENSGGOG00000026747 possible_ortholog 16 retrogenes
retro_ggor_1600, retro_ggor_1734, retro_ggor_1791, retro_ggor_1975, retro_ggor_2177, retro_ggor_2634, retro_ggor_2692, retro_ggor_277, retro_ggor_3045, retro_ggor_629, retro_ggor_666, retro_ggor_749, retro_ggor_788, retro_ggor_832, retro_ggor_833, retro_ggor_938,
Myotis lucifugus ENSMLUG00000007764 possible_ortholog 2 retrogenes
retro_mluc_1088, retro_mluc_2021,
Macaca mulatta ENSMMUG00000019118 possible_ortholog 3 retrogenes
retro_mmul_1842, retro_mmul_402, retro_mmul_438,
Monodelphis domestica ENSMODG00000013042 possible_ortholog 2 retrogenes
retro_mdom_1087, retro_mdom_31,
Otolemur garnettii ENSOGAG00000016932 possible_ortholog 1 retrogene
retro_ogar_224,
Pongo abelii ENSPPYG00000011858 possible_ortholog 14 retrogenes
retro_pabe_1004, retro_pabe_2181, retro_pabe_2361, retro_pabe_2657, retro_pabe_2885, retro_pabe_3183, retro_pabe_3673, retro_pabe_3794, retro_pabe_437, retro_pabe_554, retro_pabe_727, retro_pabe_763, retro_pabe_798, retro_pabe_880,
Sarcophilus harrisii ENSSHAG00000000319 possible_ortholog 2 retrogenes
retro_shar_70, retro_shar_767,
Ictidomys tridecemlineatus ENSSTOG00000003165 possible_ortholog 1 retrogene
retro_itri_88,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_psin_42 58.54 63.08
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Download FASTA sequences of all ENSPSIG00000004553 retrocopies