Parental gene:

SEC13, ENSPPYG00000013658

Aliases:None
Description:SEC13 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:10697]
Organism:Orangutan (Pongo abelii)
Coordinates:3:59598791..59620701(+)


>ENSPPYG00000013658
ATGAGAGAACCTGTGCTTACTTGGTGTGTACCTCTTGAACTGCTTTGCAGCCATCCTCTTCCAGTGTCTGCCTTTCTGAA
AACACAAGTCAAACTTTATACCTACAGGGCTTGTGCTGGAAAAGATGAAATGGGGAAAATGGTGTCAGTAATTAACACTG
TGGATACCTCCCATGAGGACATGATTCACGACGCACAGATGGACTACTATGGCACCCGCCTGGCAACCTGCTCATCAGAC
AGGTCCGTCAAAATCTTTGATGTGCGCAATGGAGGGCAGATCCTTATCGCCGACCTCAGGGGTCATGAGGGTCCTGTGTG
GCAAGTGGCCTGGGCTCACCCCATGTACGGCAACATCCTGGCATCGTGCTCCTATGACCGGAAAGTCATTATCTGGAGAG
AAGAAAACGGCACCTGGGAGAAGAGCCACGAGCATGCGGGACATGACTCCTCAGTGAACTCGGTGTGCTGGGCCCCCCAG
GACTACGGCCTGATCCTGGCCTGTGGGAGCTCGGATGGGGCCATCTCCCTGCTGACTTACACCGGGGAAGGCCAATGGGA
AGTAAAGAAGATCAACAACGCTCACACCATTGGCTGCAATGCCGTCAGCTGGGCCCCTGCTGTTGTACCTGGAAGCCTCA
TAGACCAGCCATCGGGGCAGAAACCCAATTACATCAAGAGGTTTGCATCAGGTGGTTGTGACAACCTCATCAAGCTGTGG
AAGGAGGAGGAGGACGGCCAGTGGAAGGAGGAGCAGAAGCTAGAAGCGCACAGTGACTGGGTTCGAGATGTGGCCTGGGC
CCCCTCCATCGGCCTGCCTACCAGCACCATCGCCAGCTGCTCCCAGGACGGTCGTGTGTTCATTTGGACTTGTGATGATG
TCTCAAGCAATACGTGGTCCCCTAAATTGTTGCACAAGTTCAATGATGTGGTGTGGCATGTGAGCTGGTCCATCACAGCC
AACATCCTGGCTGTCTCTGGTGGAGACAATAAGGTGACCCTGTGGAAGGAGTCAGTTGACGGGCAGTGGGTGTGCATCAG
TGATGTCAACAAGGGCCAGGGCTCCGTATCAGCGTCAGTGACAGAGGGCCAGCAGAACGAGCAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 32 .90 RPM
SRP007412_cerebellum 31 .01 RPM
SRP007412_heart 20 .95 RPM
SRP007412_kidney 36 .43 RPM
SRP007412_liver 54 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005118 ortholog_one2one 1 retrogene
retro_cfam_278,
Callithrix jacchus ENSCJAG00000016439 ortholog_one2one 2 retrogenes
retro_cjac_1574, retro_cjac_908,
Felis catus ENSFCAG00000011245 ortholog_one2one 1 retrogene
retro_fcat_541,
Homo sapiens ENSG00000157020 ortholog_one2one 1 retrogene
retro_hsap_2630,
Microcebus murinus ENSMICG00000002401 ortholog_one2one 1 retrogene
retro_mmur_1509,
Mus musculus ENSMUSG00000030298 ortholog_one2one 2 retrogenes
retro_mmus_2159, retro_mmus_3443,
Nomascus leucogenys ENSNLEG00000004482 ortholog_one2one 1 retrogene
retro_nleu_642,
Otolemur garnettii ENSOGAG00000017050 ortholog_one2one 1 retrogene
retro_ogar_1655,
Pan troglodytes ENSPTRG00000014619 ortholog_one2one 1 retrogene
retro_ptro_1774,
Rattus norvegicus ENSRNOG00000010628 ortholog_one2many 2 retrogenes
retro_rnor_1375, retro_rnor_1454,
Tursiops truncatus ENSTTRG00000004395 ortholog_one2one 1 retrogene
retro_ttru_917,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2333 78.67 57.07
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Download FASTA sequences of all ENSPPYG00000013658 retrocopies