Parental gene:

WDR12, ENSPPYG00000013089

Aliases:None
Description:Ribosome biogenesis protein WDR12 [Source:UniProtKB/Swiss-Prot;Acc:Q5REE6]
Organism:Orangutan (Pongo abelii)
Coordinates:2b:94267515..94301846(-)


>ENSPPYG00000013089
ATGGCTCAGCTCCAAACACGCTTCTACACTGATAACAAGAAATATGCCATAGATGATGTTCCCTTCTCAATCCCTGCTGC
CTCTGAAATTGCTGACCTTAGTAACATCATCAATAAACTACTAAAGGACAAAAATGAGTTCCACAAACATGTGGAGTTTG
ATTTCCTTATTAAGGGCCAGTTTCTGCGAATGCCCTTGGACAAACACATGGAAATGGAGAACATCTCATCAGAAGAAGTT
GTGGAAATAGAATATGTGGAGAAGTATACTGCACCCCAGCCAGAGCAATGCATGTTCCATGATGACTGGATCAGTTCAAT
TAAAGGGGCAGAGGAATGGATCTTGACTGGTTCTTATGATAAGACTTCTCGGATCTGGTCCTTGGAAGGAAAGTCAATAA
TGACAATTGTGGGACATACGGATGTTGTAAAAGATGTGGCCTGGGTGAAAAAAGATAGTTTGTCCTGCTTATTATTGAGT
GCCTCTATGGATCAGACTATTCTCTTATGGGAGTGGAATGTAGAGAGAAACAAAGTGAAAGCCCTACACTGCTGTAGAGG
TCATGCTGGAAGTGTAGATTCTATAGCTGTTGATGGCTCAGGAACTAAATTTTGCAGTGGCTCCTGGGATAAGATGCTAA
AGATCTGGTCTACAGTCCCTACAGATGAAGAAGATGAAATGGAGGAGTCCACAAATCGACCAAGAAAGAAACAGAAGACA
GAACAGTTGGGACTAACAAGGACTCCCGTAGTGACCCTCTCTGGCCACATGGAAGCAGTTTCCTCAGTTCTGTGGTCAGA
TGCTGAAGAAATCTGCAGTGCATCTTGGGACCATACAATTAGAGTGTGGGATGTTGAGTCTGGCAGTCTTAAGTCAACTT
TGACAGGAAATAAAGTGTTTAATTGTATTTCCTATTCTCCACTTTGTAAACGTTTAGCATCTGGAAGCACAGATAGGCAT
ATCAGATTGTGGGATCCCCGAACTAAAGATGGTTCTTTGGTGTCGCTGTCCCTAACCTCACATACCGGTTGGGTGACATC
AGTAAAATGGTCTCCTACCCATGAACAGCAGCTGATTTCAGGATCTTTAGATAACATTGTTAAGCTGTGGGATACAAGAA
GTTGTAAGGCTCCTCTCTATGATCTGGCTGCTCATGAAGACAAAGTTCTGAGTGTCGACTGGACAGACACAGGGCTACTT
CTGAGTGGAGGAGCAGACAATAAATTGTATTCCTACAGATATTCACCTACCACTTCCCATGTTGGGGCATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 28 .36 RPM
SRP007412_cerebellum 27 .97 RPM
SRP007412_heart 9 .06 RPM
SRP007412_kidney 12 .20 RPM
SRP007412_liver 7 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012519 ortholog_one2one 1 retrogene
retro_cfam_1759,
Choloepus hoffmanni ENSCHOG00000013851 ortholog_one2one 1 retrogene
retro_chof_118,
Callithrix jacchus ENSCJAG00000005171 ortholog_one2one 1 retrogene
retro_cjac_2690,
Cavia porcellus ENSCPOG00000008824 ortholog_one2one 1 retrogene
retro_cpor_1107,
Homo sapiens ENSG00000138442 ortholog_one2one 1 retrogene
retro_hsap_1615,
Gorilla gorilla ENSGGOG00000026073 ortholog_one2one 1 retrogene
retro_ggor_1222,
Loxodonta africana ENSLAFG00000011955 ortholog_one2one 1 retrogene
retro_lafr_1102,
Mus musculus ENSMUSG00000026019 ortholog_one2one 3 retrogenes
retro_mmus_1394, retro_mmus_2649, retro_mmus_2897,
Nomascus leucogenys ENSNLEG00000007018 ortholog_one2one 1 retrogene
retro_nleu_2743,
Pan troglodytes ENSPTRG00000012823 ortholog_one2one 1 retrogene
retro_ptro_1083,
Tursiops truncatus ENSTTRG00000001231 ortholog_one2one 1 retrogene
retro_ttru_1380,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1327 71.60 98.11
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Download FASTA sequences of all ENSPPYG00000013089 retrocopies