Parental gene:

WDR12, ENSCPOG00000008824

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_13:36828584..36852791(-)


>ENSCPOG00000008824
ATGGCTCAGCTCCAGACACGCTTCTTCACGGACAACAAGAAATACGCAGTAGATGATGTTCCTTTCTCAATCCCTGCCAG
CTCTGAAATTGCTGACCTTAGTAACATCATCAATAAATTGCTGGAGGCCAAAAATGAGTTCCACAAATATGTGGAGTTCG
ATTTCCTTATCAAAGGCCAGTTTCTACGAATGCCTTTGGCCAAGCACATGGAAGTGGAAAACATCTCATCAGAAGAAGTT
GTGGAGCTGGAATATGTGGAGAAGTATACCGCCCCCCAGCCCGAGCAGTGCATGTTCCATGATGACTGGGTCAGCGCCGT
CAAAGGGGCAGAGGAATGGATTTTGACTGGTTCTTATGATAAAACTTCTCGGATCTGGTCCTTGGAAGGAACATCAATAA
TGACAATTGTGGGACATACAGATGTTGTAAAAGATGTGGCCTGGGTGAAAAAAGACAGTTTGTCTTGCTTACTACTGAGT
GCCTCTATGGATCAGACTATTCTCCTATGGGAATGGAGTGTAGAAAGAAATAAAGTAAAAGCTCTACACTGCTGTAGAGG
TCATGCTGGAAGTGTGGATTCTATAGCAGTTGATAGCTCTGGAACTAAATTTTGCAGTGGCTCCTGGGATAAGATGCTAA
AGATCTGGTCTGCAGTCCCAACAGATGAAGAAGATGAAATGGAAGAATCCACAAATCGACCAAGAAAGAAACAGAAAACA
GAGCAGTTAGGACTAACAAGGACTCCCATAGTGACCCTCTCTGGCCACACAGAAGCAATTTCCTCAGTACTGTGGTCAGA
TGCTGAAGAAATCTGCAGTGCATCTTGGGACCACACAATTAGAGTGTGGGATGTTGAGTCTGGCAGTCTTAAGTCAACTC
TGACAGGTAATAAAGTGTTTAATTGTATTTCCTATTCTCCACTCTGTAAACGTTTAGCGTCTGGCAGCACAGATAGACAT
ATCAGACTGTGGGATCCCCGAACTAAAGATGGTTCTTTGGTGTCACTGTCTCTAACCTCACATACAGGCTGGGTTACATC
AGTAAAGTGGTCTCCAACACATGAACAACAGCTGATTTCAGGCTCTTTAGATAACATTGTGAAGCTATGGGATACAAGAA
GTTGTAAAGCTCCTCTCTATGATCTGGCTGCTCATGAAGACAAAGTTCTTAGTGTAGACTGGACAGACACGGGGCTACTT
CTGAGTGGAGGAGCAGATAATAAATTATATTCCTACAGATACTCACCTACCACTTCTCATGTGGGGGCT

Library Parental gene expression (RPM)
SRP017611_brain 18 .29 RPM
SRP017611_kidney 16 .85 RPM
SRP017611_liver 11 .67 RPM
SRP040447_lung 13 .64 RPM
SRP040447_skeletal_muscle 11 .21 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012519 ortholog_one2one 1 retrogene
retro_cfam_1759,
Choloepus hoffmanni ENSCHOG00000013851 ortholog_one2one 1 retrogene
retro_chof_118,
Callithrix jacchus ENSCJAG00000005171 ortholog_one2one 1 retrogene
retro_cjac_2690,
Homo sapiens ENSG00000138442 ortholog_one2one 1 retrogene
retro_hsap_1615,
Gorilla gorilla ENSGGOG00000026073 ortholog_one2many 1 retrogene
retro_ggor_1222,
Loxodonta africana ENSLAFG00000011955 ortholog_one2one 1 retrogene
retro_lafr_1102,
Mus musculus ENSMUSG00000026019 ortholog_one2one 3 retrogenes
retro_mmus_1394, retro_mmus_2649, retro_mmus_2897,
Nomascus leucogenys ENSNLEG00000007018 ortholog_one2one 1 retrogene
retro_nleu_2743,
Pongo abelii ENSPPYG00000013089 ortholog_one2one 1 retrogene
retro_pabe_1327,
Pan troglodytes ENSPTRG00000012823 ortholog_one2one 1 retrogene
retro_ptro_1083,
Tursiops truncatus ENSTTRG00000001231 ortholog_one2one 1 retrogene
retro_ttru_1380,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1107 74.61 74.70
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Download FASTA sequences of all ENSCPOG00000008824 retrocopies