Parental gene:

NOLC1, ENSPPYG00000002595

Aliases:None
Description:nucleolar and coiled-body phosphoprotein 1 [Source:RefSeq peptide;Acc:NP_001127603]
Organism:Orangutan (Pongo abelii)
Coordinates:10:101190730..101202385(+)


>ENSPPYG00000002595
ATGGCGGACGCCGGCATTCGCCGCGTGGTTCCCAGCGACCTGTATCCTCTCGTGCTCGGCTTCCTGCGCGATAACCAACT
CTCAGAGGTGGCCAATAAGTTCGCCAAAGCGACAGGAGCTACACAGCAGGATGCCAATGCCTCTTCCCTCTTAGACATCT
ATAGCTTCTGGCTCAACAGGTCTGCCAAGGTCCCAGAGCGAAAGTTACAGTCAAATGGACCAGTGGCTAAGAAAGCTAAG
AAGAAGGTCTCATCCAGTGACAGTGAGGACAGCAGTGAGGAGGAGGAGGAAGTTCAAGGGCCTCCAGCAAAGAAGGCTGC
TGTACCTGCCAAGCGAGTCGGTCTGCCTCCTGGGAAGGCTGCAGCCAAAGCATCAGAGAGCAGCAGCAGTGAAGAGTCCA
GTGATGATGAGGAGGAGGACCAAAAGAAACAGCCTGTCCAGAAGGGAGTTAAGCCCCAAGCCAAGGCAGCCAAAGCTCCT
CCTAAGAAGGCCAAGAGCTCTGATTCTGATTCTGACTCAAGCTCCGAGGATGAGCCACCAAAGAACCAGAAGCCAAAGAT
AACACCTGTGGCAGTTAAAGCTCAGACTAAAGCCCCTCCCAAACCAGCTCGAGCAGCACCTAAAGTAGCCAATGGTAAAG
CAGCCAGTAGCAGCAGTAGCAGCAGCAGCAGCAGTAGCAGTGATGACTCAGAGGAGGAGAAAGCAGCAGCCACCCCCAAG
AAGACTGTACCTAAAAAGCAAGCTATGGCCAAGGCCACAGTGAAAGCAGCTGCCACCCCTACCCAGAAGAGTTCCAGCAG
TGAGGATTCCTCCAGTGAGGAGGAAGAGGAGCAAAAAAAACCCATGAAAAATAAACCAGGTCCCTACAGTTCAGTCCCCC
CACCTTCTGCTCCCCCACCAAAGAAGTCTCTGGGAACCCAGCCTCCCAAGAAGGCTGTGGAGAAGCAGCAGCCTGTGGAA
AGCAGTGAAGACAGCAGTGATGAGTCTGATTCAAGTTCTGAAGAAGAGAAGAAACCCCCAACTAAGGCAGTCATCTCTAA
AGCAACCTCCAAACCACCTCCAGCAAAGAAAGCAGCAGAGAGCTCTTCAGACAGCTCAGACTCTGACAGCTCTGAGGATG
ATGAAGCTCCTTCTAAGCCAGCTGGTACCACCAAGAATTCTTCAAATAAGCCAGCTGTCACCACCAAGTCACCTGCAGTG
AAGCCAGCTGCAGCCCCCAAGCAACCTGTGGGCGGTGGCCAGAAGCTTCCCACGAGAAAGGCTGACAGCAGCTCCAGTGA
GGAAGAGAGCAGCTCCAGTGAGGAGGAGAAGACAAAGAAGATGGTGGCCACCACTAAGCCCAAGGCAACTGCCAAAGCAG
CTCCACCTCTGCCTGCCAAGCAGGCTCCTCAGGGTAGTAGGGACAGCAGCTCTGATTCAGACAGCTCCAGCAGTGAGGAA
GAGGAGGAGGAAGAGAAGACATCTAAGTCTGCAGTTAAGAAGAAGCCACAAAAGGTAGCAGGAGGTGCATCCCCTTCCAA
GCCAGCCTCTGCAAAGAAAAGAAAGGCTGAGCGCAGCAGCAGTTCTTCCTCTGATGACTCCAGTGAGGAGGAGGAAGAGA
AGCCCAAGGGCAAGGGCTCTCCAAGACCACAAGCCCCCAGGGCCAATGGCACCTCTGCACTGACTGCCCAGAATGGAAAA
GCAGCTAAGAACAGTGAGGAGGAGGAAGAAGAAAAGAAAAAGGCGGCAGTGGTAGTTTCCAAGTCAGAGTCTCACTGTGT
CACCCAGACCGGCGTGCAATGGCATGATCACGGCTTGTGCAGCCTTAACCTCATGGACTCAGGTTCATTAAAGAAGCGGA
AGCAGAATGAGGCTGCCAAGGAGGCAGAGACTCCTCAGGCCAAGAAGATAAAGCTTCAGACCCCTAACACATTTCCAAAA
AGGAAGAAAGGAGAAAAAAGGGCATCATCCCCATTCCGAAGGGTCAGGGAGGAGGAAATTGAGGTGGATTCACGAGTTGC
AGACAACTCCTTTGATGCCAAGCGAGGTGCAGCTGGAGACTGGGGAGAGCGAGCCAATCAGGTTTTGAAGTTCACCAAAG
GCAAGTCGTTCCGGCATGAGAAAACCAAGAAGAAGCGGGGCAGCTACCGGGGAGGCTCAATCTCTGTCCAGGTCAATTCT
ATTAAGTTTGACAGCGAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 88 .69 RPM
SRP007412_cerebellum 79 .04 RPM
SRP007412_heart 24 .41 RPM
SRP007412_kidney 40 .97 RPM
SRP007412_liver 48 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000010062 ortholog_one2many 1 retrogene
retro_cfam_1047,
Callithrix jacchus ENSCJAG00000017832 ortholog_one2one 2 retrogenes
retro_cjac_4136, retro_cjac_4187,
Homo sapiens ENSG00000166197 ortholog_one2one 1 retrogene
retro_hsap_4781,
Nomascus leucogenys ENSNLEG00000015012 ortholog_one2one 1 retrogene
retro_nleu_1101,
Pan troglodytes ENSPTRG00000023882 ortholog_one2one 1 retrogene
retro_ptro_3182,
Tursiops truncatus ENSTTRG00000014974 ortholog_one2many 1 retrogene
retro_ttru_155,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3721 65.66 83.29
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000002595 retrocopies